Gene : Cucsa.139620 C. sativus v1.0
Defline:  (1 of 2) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  94
Name:  ? Cucsa.139620 Secondary Identifier:  ? PAC:16963393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.139620 0.5kb upstream 0.5kb upstream 9265 true scaffold01066: 828873-838137 Cucumis sativus
Cucsa.139620 0.5kb upstream 0.5kb upstream 500 false scaffold01066: 837638-838137 Cucumis sativus
Cucsa.139620 0.5kb downstream 0.5kb downstream 9265 true scaffold01066: 828373-837637 Cucumis sativus
Cucsa.139620 0.5kb downstream 0.5kb downstream 500 false scaffold01066: 828373-828872 Cucumis sativus
Cucsa.139620 1.0kb upstream 1.0kb upstream 9765 true scaffold01066: 828873-838637 Cucumis sativus
Cucsa.139620 1.0kb upstream 1.0kb upstream 1000 false scaffold01066: 837638-838637 Cucumis sativus
Cucsa.139620 1.0kb downstream 1.0kb downstream 9765 true scaffold01066: 827873-837637 Cucumis sativus
Cucsa.139620 1.0kb downstream 1.0kb downstream 1000 false scaffold01066: 827873-828872 Cucumis sativus
Cucsa.139620 2.0kb upstream 2.0kb upstream 10765 true scaffold01066: 828873-839637 Cucumis sativus
Cucsa.139620 2.0kb upstream 2.0kb upstream 2000 false scaffold01066: 837638-839637 Cucumis sativus
Cucsa.139620 2.0kb downstream 2.0kb downstream 10765 true scaffold01066: 826873-837637 Cucumis sativus
Cucsa.139620 2.0kb downstream 2.0kb downstream 2000 false scaffold01066: 826873-828872 Cucumis sativus
Cucsa.139620 5.0kb upstream 5.0kb upstream 13765 true scaffold01066: 828873-842637 Cucumis sativus
Cucsa.139620 5.0kb upstream 5.0kb upstream 5000 false scaffold01066: 837638-842637 Cucumis sativus
Cucsa.139620 5.0kb downstream 5.0kb downstream 13765 true scaffold01066: 823873-837637 Cucumis sativus
Cucsa.139620 5.0kb downstream 5.0kb downstream 5000 false scaffold01066: 823873-828872 Cucumis sativus
Cucsa.139620 10.0kb upstream 10.0kb upstream 18765 true scaffold01066: 828873-847637 Cucumis sativus
Cucsa.139620 10.0kb upstream 10.0kb upstream 10000 false scaffold01066: 837638-847637 Cucumis sativus
Cucsa.139620 10.0kb downstream 10.0kb downstream 18765 true scaffold01066: 818873-837637 Cucumis sativus
Cucsa.139620 10.0kb downstream 10.0kb downstream 10000 false scaffold01066: 818873-828872 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307292 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain