Gene : Cucsa.139040 C. sativus v1.0
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  36
Name:  ? Cucsa.139040 Secondary Identifier:  ? PAC:16963321
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7238 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.139040 0.5kb upstream 0.5kb upstream 9543 true scaffold01066: 262838-272380 Cucumis sativus
Cucsa.139040 0.5kb upstream 0.5kb upstream 500 false scaffold01066: 271881-272380 Cucumis sativus
Cucsa.139040 0.5kb downstream 0.5kb downstream 9543 true scaffold01066: 262338-271880 Cucumis sativus
Cucsa.139040 0.5kb downstream 0.5kb downstream 500 false scaffold01066: 262338-262837 Cucumis sativus
Cucsa.139040 1.0kb upstream 1.0kb upstream 10043 true scaffold01066: 262838-272880 Cucumis sativus
Cucsa.139040 1.0kb upstream 1.0kb upstream 1000 false scaffold01066: 271881-272880 Cucumis sativus
Cucsa.139040 1.0kb downstream 1.0kb downstream 10043 true scaffold01066: 261838-271880 Cucumis sativus
Cucsa.139040 1.0kb downstream 1.0kb downstream 1000 false scaffold01066: 261838-262837 Cucumis sativus
Cucsa.139040 2.0kb upstream 2.0kb upstream 11043 true scaffold01066: 262838-273880 Cucumis sativus
Cucsa.139040 2.0kb upstream 2.0kb upstream 2000 false scaffold01066: 271881-273880 Cucumis sativus
Cucsa.139040 2.0kb downstream 2.0kb downstream 11043 true scaffold01066: 260838-271880 Cucumis sativus
Cucsa.139040 2.0kb downstream 2.0kb downstream 2000 false scaffold01066: 260838-262837 Cucumis sativus
Cucsa.139040 5.0kb upstream 5.0kb upstream 14043 true scaffold01066: 262838-276880 Cucumis sativus
Cucsa.139040 5.0kb upstream 5.0kb upstream 5000 false scaffold01066: 271881-276880 Cucumis sativus
Cucsa.139040 5.0kb downstream 5.0kb downstream 14043 true scaffold01066: 257838-271880 Cucumis sativus
Cucsa.139040 5.0kb downstream 5.0kb downstream 5000 false scaffold01066: 257838-262837 Cucumis sativus
Cucsa.139040 10.0kb upstream 10.0kb upstream 19043 true scaffold01066: 262838-281880 Cucumis sativus
Cucsa.139040 10.0kb upstream 10.0kb upstream 10000 false scaffold01066: 271881-281880 Cucumis sativus
Cucsa.139040 10.0kb downstream 10.0kb downstream 19043 true scaffold01066: 252838-271880 Cucumis sativus
Cucsa.139040 10.0kb downstream 10.0kb downstream 10000 false scaffold01066: 252838-262837 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304647 5265 Fabidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain