Gene : Cucsa.137640 C. sativus v1.0
Defline:  (1 of 3) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  35
Name:  ? Cucsa.137640 Secondary Identifier:  ? PAC:16963228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.137640 0.5kb upstream 0.5kb upstream 1613 true scaffold01053: 404548-406160 Cucumis sativus
Cucsa.137640 0.5kb upstream 0.5kb upstream 500 false scaffold01053: 404548-405047 Cucumis sativus
Cucsa.137640 0.5kb downstream 0.5kb downstream 1613 true scaffold01053: 405048-406660 Cucumis sativus
Cucsa.137640 0.5kb downstream 0.5kb downstream 500 false scaffold01053: 406161-406660 Cucumis sativus
Cucsa.137640 1.0kb upstream 1.0kb upstream 2113 true scaffold01053: 404048-406160 Cucumis sativus
Cucsa.137640 1.0kb upstream 1.0kb upstream 1000 false scaffold01053: 404048-405047 Cucumis sativus
Cucsa.137640 1.0kb downstream 1.0kb downstream 2113 true scaffold01053: 405048-407160 Cucumis sativus
Cucsa.137640 1.0kb downstream 1.0kb downstream 1000 false scaffold01053: 406161-407160 Cucumis sativus
Cucsa.137640 2.0kb upstream 2.0kb upstream 3113 true scaffold01053: 403048-406160 Cucumis sativus
Cucsa.137640 2.0kb upstream 2.0kb upstream 2000 false scaffold01053: 403048-405047 Cucumis sativus
Cucsa.137640 2.0kb downstream 2.0kb downstream 3113 true scaffold01053: 405048-408160 Cucumis sativus
Cucsa.137640 2.0kb downstream 2.0kb downstream 2000 false scaffold01053: 406161-408160 Cucumis sativus
Cucsa.137640 5.0kb upstream 5.0kb upstream 6113 true scaffold01053: 400048-406160 Cucumis sativus
Cucsa.137640 5.0kb upstream 5.0kb upstream 5000 false scaffold01053: 400048-405047 Cucumis sativus
Cucsa.137640 5.0kb downstream 5.0kb downstream 6113 true scaffold01053: 405048-411160 Cucumis sativus
Cucsa.137640 5.0kb downstream 5.0kb downstream 5000 false scaffold01053: 406161-411160 Cucumis sativus
Cucsa.137640 10.0kb upstream 10.0kb upstream 11113 true scaffold01053: 395048-406160 Cucumis sativus
Cucsa.137640 10.0kb upstream 10.0kb upstream 10000 false scaffold01053: 395048-405047 Cucumis sativus
Cucsa.137640 10.0kb downstream 10.0kb downstream 11113 true scaffold01053: 405048-416160 Cucumis sativus
Cucsa.137640 10.0kb downstream 10.0kb downstream 10000 false scaffold01053: 406161-416160 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606728 5273 Angiosperm View MSA
122237747 5265 Fabidae View MSA
123983276 5270 Rosid View MSA
123558904 5271 Pentapetalae View MSA
122593712 5272 Eudicot View MSA
123429076 5275 Viridiplantae View MSA
120879016 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain