Gene : Cucsa.137750 C. sativus v1.0
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  46
Name:  ? Cucsa.137750 Secondary Identifier:  ? PAC:16963242
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ARO-PWY Cucumis sativus pathologic  
Csativus PWY-6163 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.137750 0.5kb upstream 0.5kb upstream 5873 true scaffold01053: 474719-480591 Cucumis sativus
Cucsa.137750 0.5kb upstream 0.5kb upstream 500 false scaffold01053: 480092-480591 Cucumis sativus
Cucsa.137750 0.5kb downstream 0.5kb downstream 5873 true scaffold01053: 474219-480091 Cucumis sativus
Cucsa.137750 0.5kb downstream 0.5kb downstream 500 false scaffold01053: 474219-474718 Cucumis sativus
Cucsa.137750 1.0kb upstream 1.0kb upstream 6373 true scaffold01053: 474719-481091 Cucumis sativus
Cucsa.137750 1.0kb upstream 1.0kb upstream 1000 false scaffold01053: 480092-481091 Cucumis sativus
Cucsa.137750 1.0kb downstream 1.0kb downstream 6373 true scaffold01053: 473719-480091 Cucumis sativus
Cucsa.137750 1.0kb downstream 1.0kb downstream 1000 false scaffold01053: 473719-474718 Cucumis sativus
Cucsa.137750 2.0kb upstream 2.0kb upstream 7373 true scaffold01053: 474719-482091 Cucumis sativus
Cucsa.137750 2.0kb upstream 2.0kb upstream 2000 false scaffold01053: 480092-482091 Cucumis sativus
Cucsa.137750 2.0kb downstream 2.0kb downstream 7373 true scaffold01053: 472719-480091 Cucumis sativus
Cucsa.137750 2.0kb downstream 2.0kb downstream 2000 false scaffold01053: 472719-474718 Cucumis sativus
Cucsa.137750 5.0kb upstream 5.0kb upstream 10373 true scaffold01053: 474719-485091 Cucumis sativus
Cucsa.137750 5.0kb upstream 5.0kb upstream 5000 false scaffold01053: 480092-485091 Cucumis sativus
Cucsa.137750 5.0kb downstream 5.0kb downstream 10373 true scaffold01053: 469719-480091 Cucumis sativus
Cucsa.137750 5.0kb downstream 5.0kb downstream 5000 false scaffold01053: 469719-474718 Cucumis sativus
Cucsa.137750 10.0kb upstream 10.0kb upstream 10469 true scaffold01053: 474719-485187 Cucumis sativus
Cucsa.137750 10.0kb upstream 10.0kb upstream 5096 false scaffold01053: 480092-485187 Cucumis sativus
Cucsa.137750 10.0kb downstream 10.0kb downstream 15373 true scaffold01053: 464719-480091 Cucumis sativus
Cucsa.137750 10.0kb downstream 10.0kb downstream 10000 false scaffold01053: 464719-474718 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122305453 5265 Fabidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain