Gene : Cucsa.136790 C. sativus v1.0
Defline:  (1 of 1) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  171
Name:  ? Cucsa.136790 Secondary Identifier:  ? PAC:16963162
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5466 Cucumis sativus pathologic  
Csativus PWY-6824 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.136790 0.5kb upstream 0.5kb upstream 3490 true scaffold01044: 1385457-1388946 Cucumis sativus
Cucsa.136790 0.5kb upstream 0.5kb upstream 500 false scaffold01044: 1388447-1388946 Cucumis sativus
Cucsa.136790 0.5kb downstream 0.5kb downstream 3490 true scaffold01044: 1384957-1388446 Cucumis sativus
Cucsa.136790 0.5kb downstream 0.5kb downstream 500 false scaffold01044: 1384957-1385456 Cucumis sativus
Cucsa.136790 1.0kb upstream 1.0kb upstream 3990 true scaffold01044: 1385457-1389446 Cucumis sativus
Cucsa.136790 1.0kb upstream 1.0kb upstream 1000 false scaffold01044: 1388447-1389446 Cucumis sativus
Cucsa.136790 1.0kb downstream 1.0kb downstream 3990 true scaffold01044: 1384457-1388446 Cucumis sativus
Cucsa.136790 1.0kb downstream 1.0kb downstream 1000 false scaffold01044: 1384457-1385456 Cucumis sativus
Cucsa.136790 2.0kb upstream 2.0kb upstream 4990 true scaffold01044: 1385457-1390446 Cucumis sativus
Cucsa.136790 2.0kb upstream 2.0kb upstream 2000 false scaffold01044: 1388447-1390446 Cucumis sativus
Cucsa.136790 2.0kb downstream 2.0kb downstream 4990 true scaffold01044: 1383457-1388446 Cucumis sativus
Cucsa.136790 2.0kb downstream 2.0kb downstream 2000 false scaffold01044: 1383457-1385456 Cucumis sativus
Cucsa.136790 5.0kb upstream 5.0kb upstream 7990 true scaffold01044: 1385457-1393446 Cucumis sativus
Cucsa.136790 5.0kb upstream 5.0kb upstream 5000 false scaffold01044: 1388447-1393446 Cucumis sativus
Cucsa.136790 5.0kb downstream 5.0kb downstream 7990 true scaffold01044: 1380457-1388446 Cucumis sativus
Cucsa.136790 5.0kb downstream 5.0kb downstream 5000 false scaffold01044: 1380457-1385456 Cucumis sativus
Cucsa.136790 10.0kb upstream 10.0kb upstream 12990 true scaffold01044: 1385457-1398446 Cucumis sativus
Cucsa.136790 10.0kb upstream 10.0kb upstream 10000 false scaffold01044: 1388447-1398446 Cucumis sativus
Cucsa.136790 10.0kb downstream 10.0kb downstream 12990 true scaffold01044: 1375457-1388446 Cucumis sativus
Cucsa.136790 10.0kb downstream 10.0kb downstream 10000 false scaffold01044: 1375457-1385456 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300739 5265 Fabidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain