Gene : Cucsa.136180 C. sativus v1.0
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  110
Name:  ? Cucsa.136180 Secondary Identifier:  ? PAC:16963065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.136180 0.5kb upstream 0.5kb upstream 2770 true scaffold01044: 864459-867228 Cucumis sativus
Cucsa.136180 0.5kb upstream 0.5kb upstream 500 false scaffold01044: 864459-864958 Cucumis sativus
Cucsa.136180 0.5kb downstream 0.5kb downstream 2770 true scaffold01044: 864959-867728 Cucumis sativus
Cucsa.136180 0.5kb downstream 0.5kb downstream 500 false scaffold01044: 867229-867728 Cucumis sativus
Cucsa.136180 1.0kb upstream 1.0kb upstream 3270 true scaffold01044: 863959-867228 Cucumis sativus
Cucsa.136180 1.0kb upstream 1.0kb upstream 1000 false scaffold01044: 863959-864958 Cucumis sativus
Cucsa.136180 1.0kb downstream 1.0kb downstream 3270 true scaffold01044: 864959-868228 Cucumis sativus
Cucsa.136180 1.0kb downstream 1.0kb downstream 1000 false scaffold01044: 867229-868228 Cucumis sativus
Cucsa.136180 2.0kb upstream 2.0kb upstream 4270 true scaffold01044: 862959-867228 Cucumis sativus
Cucsa.136180 2.0kb upstream 2.0kb upstream 2000 false scaffold01044: 862959-864958 Cucumis sativus
Cucsa.136180 2.0kb downstream 2.0kb downstream 4270 true scaffold01044: 864959-869228 Cucumis sativus
Cucsa.136180 2.0kb downstream 2.0kb downstream 2000 false scaffold01044: 867229-869228 Cucumis sativus
Cucsa.136180 5.0kb upstream 5.0kb upstream 7270 true scaffold01044: 859959-867228 Cucumis sativus
Cucsa.136180 5.0kb upstream 5.0kb upstream 5000 false scaffold01044: 859959-864958 Cucumis sativus
Cucsa.136180 5.0kb downstream 5.0kb downstream 7270 true scaffold01044: 864959-872228 Cucumis sativus
Cucsa.136180 5.0kb downstream 5.0kb downstream 5000 false scaffold01044: 867229-872228 Cucumis sativus
Cucsa.136180 10.0kb upstream 10.0kb upstream 12270 true scaffold01044: 854959-867228 Cucumis sativus
Cucsa.136180 10.0kb upstream 10.0kb upstream 10000 false scaffold01044: 854959-864958 Cucumis sativus
Cucsa.136180 10.0kb downstream 10.0kb downstream 12270 true scaffold01044: 864959-877228 Cucumis sativus
Cucsa.136180 10.0kb downstream 10.0kb downstream 10000 false scaffold01044: 867229-877228 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain