Gene : Cucsa.135330 C. sativus v1.0
Defline:  (1 of 1) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  26
Name:  ? Cucsa.135330 Secondary Identifier:  ? PAC:16962909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.135330 0.5kb upstream 0.5kb upstream 7880 true scaffold01044: 182045-189924 Cucumis sativus
Cucsa.135330 0.5kb upstream 0.5kb upstream 500 false scaffold01044: 189425-189924 Cucumis sativus
Cucsa.135330 0.5kb downstream 0.5kb downstream 7880 true scaffold01044: 181545-189424 Cucumis sativus
Cucsa.135330 0.5kb downstream 0.5kb downstream 500 false scaffold01044: 181545-182044 Cucumis sativus
Cucsa.135330 1.0kb upstream 1.0kb upstream 8380 true scaffold01044: 182045-190424 Cucumis sativus
Cucsa.135330 1.0kb upstream 1.0kb upstream 1000 false scaffold01044: 189425-190424 Cucumis sativus
Cucsa.135330 1.0kb downstream 1.0kb downstream 8380 true scaffold01044: 181045-189424 Cucumis sativus
Cucsa.135330 1.0kb downstream 1.0kb downstream 1000 false scaffold01044: 181045-182044 Cucumis sativus
Cucsa.135330 2.0kb upstream 2.0kb upstream 9380 true scaffold01044: 182045-191424 Cucumis sativus
Cucsa.135330 2.0kb upstream 2.0kb upstream 2000 false scaffold01044: 189425-191424 Cucumis sativus
Cucsa.135330 2.0kb downstream 2.0kb downstream 9380 true scaffold01044: 180045-189424 Cucumis sativus
Cucsa.135330 2.0kb downstream 2.0kb downstream 2000 false scaffold01044: 180045-182044 Cucumis sativus
Cucsa.135330 5.0kb upstream 5.0kb upstream 12380 true scaffold01044: 182045-194424 Cucumis sativus
Cucsa.135330 5.0kb upstream 5.0kb upstream 5000 false scaffold01044: 189425-194424 Cucumis sativus
Cucsa.135330 5.0kb downstream 5.0kb downstream 12380 true scaffold01044: 177045-189424 Cucumis sativus
Cucsa.135330 5.0kb downstream 5.0kb downstream 5000 false scaffold01044: 177045-182044 Cucumis sativus
Cucsa.135330 10.0kb upstream 10.0kb upstream 17380 true scaffold01044: 182045-199424 Cucumis sativus
Cucsa.135330 10.0kb upstream 10.0kb upstream 10000 false scaffold01044: 189425-199424 Cucumis sativus
Cucsa.135330 10.0kb downstream 10.0kb downstream 17380 true scaffold01044: 172045-189424 Cucumis sativus
Cucsa.135330 10.0kb downstream 10.0kb downstream 10000 false scaffold01044: 172045-182044 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309301 5265 Fabidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain