Gene : Cucsa.135450 C. sativus v1.0
Defline:  (1 of 1) PTHR31500:SF10 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  38
Name:  ? Cucsa.135450 Secondary Identifier:  ? PAC:16962932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.135450 0.5kb upstream 0.5kb upstream 4825 true scaffold01044: 317419-322243 Cucumis sativus
Cucsa.135450 0.5kb upstream 0.5kb upstream 500 false scaffold01044: 321744-322243 Cucumis sativus
Cucsa.135450 0.5kb downstream 0.5kb downstream 4825 true scaffold01044: 316919-321743 Cucumis sativus
Cucsa.135450 0.5kb downstream 0.5kb downstream 500 false scaffold01044: 316919-317418 Cucumis sativus
Cucsa.135450 1.0kb upstream 1.0kb upstream 5325 true scaffold01044: 317419-322743 Cucumis sativus
Cucsa.135450 1.0kb upstream 1.0kb upstream 1000 false scaffold01044: 321744-322743 Cucumis sativus
Cucsa.135450 1.0kb downstream 1.0kb downstream 5325 true scaffold01044: 316419-321743 Cucumis sativus
Cucsa.135450 1.0kb downstream 1.0kb downstream 1000 false scaffold01044: 316419-317418 Cucumis sativus
Cucsa.135450 2.0kb upstream 2.0kb upstream 6325 true scaffold01044: 317419-323743 Cucumis sativus
Cucsa.135450 2.0kb upstream 2.0kb upstream 2000 false scaffold01044: 321744-323743 Cucumis sativus
Cucsa.135450 2.0kb downstream 2.0kb downstream 6325 true scaffold01044: 315419-321743 Cucumis sativus
Cucsa.135450 2.0kb downstream 2.0kb downstream 2000 false scaffold01044: 315419-317418 Cucumis sativus
Cucsa.135450 5.0kb upstream 5.0kb upstream 9325 true scaffold01044: 317419-326743 Cucumis sativus
Cucsa.135450 5.0kb upstream 5.0kb upstream 5000 false scaffold01044: 321744-326743 Cucumis sativus
Cucsa.135450 5.0kb downstream 5.0kb downstream 9325 true scaffold01044: 312419-321743 Cucumis sativus
Cucsa.135450 5.0kb downstream 5.0kb downstream 5000 false scaffold01044: 312419-317418 Cucumis sativus
Cucsa.135450 10.0kb upstream 10.0kb upstream 14325 true scaffold01044: 317419-331743 Cucumis sativus
Cucsa.135450 10.0kb upstream 10.0kb upstream 10000 false scaffold01044: 321744-331743 Cucumis sativus
Cucsa.135450 10.0kb downstream 10.0kb downstream 14325 true scaffold01044: 307419-321743 Cucumis sativus
Cucsa.135450 10.0kb downstream 10.0kb downstream 10000 false scaffold01044: 307419-317418 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122311157 5265 Fabidae View MSA
124064168 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain