Gene : Cucsa.142290 C. sativus v1.0
Defline:  (1 of 1) 3.4.22.52 - Calpain-1 / Mu-calpain Genomic Order:  76
Name:  ? Cucsa.142290 Secondary Identifier:  ? PAC:16963623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142290 0.5kb upstream 0.5kb upstream 25591 true scaffold01079: 568203-593793 Cucumis sativus
Cucsa.142290 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 568203-568702 Cucumis sativus
Cucsa.142290 0.5kb downstream 0.5kb downstream 25591 true scaffold01079: 568703-594293 Cucumis sativus
Cucsa.142290 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 593794-594293 Cucumis sativus
Cucsa.142290 1.0kb upstream 1.0kb upstream 26091 true scaffold01079: 567703-593793 Cucumis sativus
Cucsa.142290 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 567703-568702 Cucumis sativus
Cucsa.142290 1.0kb downstream 1.0kb downstream 26091 true scaffold01079: 568703-594793 Cucumis sativus
Cucsa.142290 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 593794-594793 Cucumis sativus
Cucsa.142290 2.0kb upstream 2.0kb upstream 27091 true scaffold01079: 566703-593793 Cucumis sativus
Cucsa.142290 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 566703-568702 Cucumis sativus
Cucsa.142290 2.0kb downstream 2.0kb downstream 27091 true scaffold01079: 568703-595793 Cucumis sativus
Cucsa.142290 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 593794-595793 Cucumis sativus
Cucsa.142290 5.0kb upstream 5.0kb upstream 30091 true scaffold01079: 563703-593793 Cucumis sativus
Cucsa.142290 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 563703-568702 Cucumis sativus
Cucsa.142290 5.0kb downstream 5.0kb downstream 30091 true scaffold01079: 568703-598793 Cucumis sativus
Cucsa.142290 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 593794-598793 Cucumis sativus
Cucsa.142290 10.0kb upstream 10.0kb upstream 35091 true scaffold01079: 558703-593793 Cucumis sativus
Cucsa.142290 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 558703-568702 Cucumis sativus
Cucsa.142290 10.0kb downstream 10.0kb downstream 35091 true scaffold01079: 568703-603793 Cucumis sativus
Cucsa.142290 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 593794-603793 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300937 5265 Fabidae View MSA
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain