Gene : Cucsa.142190 C. sativus v1.0
Defline:  (1 of 1) PTHR11624:SF21 - 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL Genomic Order:  66
Name:  ? Cucsa.142190 Secondary Identifier:  ? PAC:16963601
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5046 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142190 0.5kb upstream 0.5kb upstream 7208 true scaffold01079: 482093-489300 Cucumis sativus
Cucsa.142190 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 488801-489300 Cucumis sativus
Cucsa.142190 0.5kb downstream 0.5kb downstream 7208 true scaffold01079: 481593-488800 Cucumis sativus
Cucsa.142190 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 481593-482092 Cucumis sativus
Cucsa.142190 1.0kb upstream 1.0kb upstream 7708 true scaffold01079: 482093-489800 Cucumis sativus
Cucsa.142190 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 488801-489800 Cucumis sativus
Cucsa.142190 1.0kb downstream 1.0kb downstream 7708 true scaffold01079: 481093-488800 Cucumis sativus
Cucsa.142190 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 481093-482092 Cucumis sativus
Cucsa.142190 2.0kb upstream 2.0kb upstream 8708 true scaffold01079: 482093-490800 Cucumis sativus
Cucsa.142190 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 488801-490800 Cucumis sativus
Cucsa.142190 2.0kb downstream 2.0kb downstream 8708 true scaffold01079: 480093-488800 Cucumis sativus
Cucsa.142190 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 480093-482092 Cucumis sativus
Cucsa.142190 5.0kb upstream 5.0kb upstream 11708 true scaffold01079: 482093-493800 Cucumis sativus
Cucsa.142190 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 488801-493800 Cucumis sativus
Cucsa.142190 5.0kb downstream 5.0kb downstream 11708 true scaffold01079: 477093-488800 Cucumis sativus
Cucsa.142190 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 477093-482092 Cucumis sativus
Cucsa.142190 10.0kb upstream 10.0kb upstream 16708 true scaffold01079: 482093-498800 Cucumis sativus
Cucsa.142190 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 488801-498800 Cucumis sativus
Cucsa.142190 10.0kb downstream 10.0kb downstream 16708 true scaffold01079: 472093-488800 Cucumis sativus
Cucsa.142190 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 472093-482092 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309048 5265 Fabidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain