Gene : Cucsa.142180 C. sativus v1.0
Defline:  (1 of 1) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  65
Name:  ? Cucsa.142180 Secondary Identifier:  ? PAC:16963600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142180 0.5kb upstream 0.5kb upstream 6617 true scaffold01079: 474526-481142 Cucumis sativus
Cucsa.142180 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 474526-475025 Cucumis sativus
Cucsa.142180 0.5kb downstream 0.5kb downstream 6617 true scaffold01079: 475026-481642 Cucumis sativus
Cucsa.142180 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 481143-481642 Cucumis sativus
Cucsa.142180 1.0kb upstream 1.0kb upstream 7117 true scaffold01079: 474026-481142 Cucumis sativus
Cucsa.142180 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 474026-475025 Cucumis sativus
Cucsa.142180 1.0kb downstream 1.0kb downstream 7117 true scaffold01079: 475026-482142 Cucumis sativus
Cucsa.142180 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 481143-482142 Cucumis sativus
Cucsa.142180 2.0kb upstream 2.0kb upstream 8117 true scaffold01079: 473026-481142 Cucumis sativus
Cucsa.142180 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 473026-475025 Cucumis sativus
Cucsa.142180 2.0kb downstream 2.0kb downstream 8117 true scaffold01079: 475026-483142 Cucumis sativus
Cucsa.142180 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 481143-483142 Cucumis sativus
Cucsa.142180 5.0kb upstream 5.0kb upstream 11117 true scaffold01079: 470026-481142 Cucumis sativus
Cucsa.142180 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 470026-475025 Cucumis sativus
Cucsa.142180 5.0kb downstream 5.0kb downstream 11117 true scaffold01079: 475026-486142 Cucumis sativus
Cucsa.142180 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 481143-486142 Cucumis sativus
Cucsa.142180 10.0kb upstream 10.0kb upstream 16117 true scaffold01079: 465026-481142 Cucumis sativus
Cucsa.142180 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 465026-475025 Cucumis sativus
Cucsa.142180 10.0kb downstream 10.0kb downstream 16117 true scaffold01079: 475026-491142 Cucumis sativus
Cucsa.142180 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 481143-491142 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300671 5265 Fabidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain