Gene : Cucsa.142060 C. sativus v1.0
Defline:  (1 of 1) PTHR12526:SF391 - SUCROSE SYNTHASE 1-RELATED Genomic Order:  53
Name:  ? Cucsa.142060 Secondary Identifier:  ? PAC:16963576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-3801 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142060 0.5kb upstream 0.5kb upstream 5631 true scaffold01079: 378520-384150 Cucumis sativus
Cucsa.142060 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 383651-384150 Cucumis sativus
Cucsa.142060 0.5kb downstream 0.5kb downstream 5631 true scaffold01079: 378020-383650 Cucumis sativus
Cucsa.142060 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 378020-378519 Cucumis sativus
Cucsa.142060 1.0kb upstream 1.0kb upstream 6131 true scaffold01079: 378520-384650 Cucumis sativus
Cucsa.142060 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 383651-384650 Cucumis sativus
Cucsa.142060 1.0kb downstream 1.0kb downstream 6131 true scaffold01079: 377520-383650 Cucumis sativus
Cucsa.142060 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 377520-378519 Cucumis sativus
Cucsa.142060 2.0kb upstream 2.0kb upstream 7131 true scaffold01079: 378520-385650 Cucumis sativus
Cucsa.142060 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 383651-385650 Cucumis sativus
Cucsa.142060 2.0kb downstream 2.0kb downstream 7131 true scaffold01079: 376520-383650 Cucumis sativus
Cucsa.142060 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 376520-378519 Cucumis sativus
Cucsa.142060 5.0kb upstream 5.0kb upstream 10131 true scaffold01079: 378520-388650 Cucumis sativus
Cucsa.142060 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 383651-388650 Cucumis sativus
Cucsa.142060 5.0kb downstream 5.0kb downstream 10131 true scaffold01079: 373520-383650 Cucumis sativus
Cucsa.142060 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 373520-378519 Cucumis sativus
Cucsa.142060 10.0kb upstream 10.0kb upstream 15131 true scaffold01079: 378520-393650 Cucumis sativus
Cucsa.142060 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 383651-393650 Cucumis sativus
Cucsa.142060 10.0kb downstream 10.0kb downstream 15131 true scaffold01079: 368520-383650 Cucumis sativus
Cucsa.142060 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 368520-378519 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311473 5265 Fabidae View MSA
124060736 5270 Rosid View MSA
123745415 5271 Pentapetalae View MSA
122791734 5272 Eudicot View MSA
122050906 5273 Angiosperm View MSA
121348463 5274 Embryophyte View MSA
123424829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain