Gene : Cucsa.140340 C. sativus v1.0
Defline:  (1 of 1) PTHR13011 - TFIIF-ALPHA Genomic Order:  13
Name:  ? Cucsa.140340 Secondary Identifier:  ? PAC:16963437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.140340 0.5kb upstream 0.5kb upstream 6314 true scaffold01071: 163052-169365 Cucumis sativus
Cucsa.140340 0.5kb upstream 0.5kb upstream 500 false scaffold01071: 163052-163551 Cucumis sativus
Cucsa.140340 0.5kb downstream 0.5kb downstream 6314 true scaffold01071: 163552-169865 Cucumis sativus
Cucsa.140340 0.5kb downstream 0.5kb downstream 500 false scaffold01071: 169366-169865 Cucumis sativus
Cucsa.140340 1.0kb upstream 1.0kb upstream 6814 true scaffold01071: 162552-169365 Cucumis sativus
Cucsa.140340 1.0kb upstream 1.0kb upstream 1000 false scaffold01071: 162552-163551 Cucumis sativus
Cucsa.140340 1.0kb downstream 1.0kb downstream 6814 true scaffold01071: 163552-170365 Cucumis sativus
Cucsa.140340 1.0kb downstream 1.0kb downstream 1000 false scaffold01071: 169366-170365 Cucumis sativus
Cucsa.140340 2.0kb upstream 2.0kb upstream 7814 true scaffold01071: 161552-169365 Cucumis sativus
Cucsa.140340 2.0kb upstream 2.0kb upstream 2000 false scaffold01071: 161552-163551 Cucumis sativus
Cucsa.140340 2.0kb downstream 2.0kb downstream 7814 true scaffold01071: 163552-171365 Cucumis sativus
Cucsa.140340 2.0kb downstream 2.0kb downstream 2000 false scaffold01071: 169366-171365 Cucumis sativus
Cucsa.140340 5.0kb upstream 5.0kb upstream 10814 true scaffold01071: 158552-169365 Cucumis sativus
Cucsa.140340 5.0kb upstream 5.0kb upstream 5000 false scaffold01071: 158552-163551 Cucumis sativus
Cucsa.140340 5.0kb downstream 5.0kb downstream 10814 true scaffold01071: 163552-174365 Cucumis sativus
Cucsa.140340 5.0kb downstream 5.0kb downstream 5000 false scaffold01071: 169366-174365 Cucumis sativus
Cucsa.140340 10.0kb upstream 10.0kb upstream 15814 true scaffold01071: 153552-169365 Cucumis sativus
Cucsa.140340 10.0kb upstream 10.0kb upstream 10000 false scaffold01071: 153552-163551 Cucumis sativus
Cucsa.140340 10.0kb downstream 10.0kb downstream 15814 true scaffold01071: 163552-179365 Cucumis sativus
Cucsa.140340 10.0kb downstream 10.0kb downstream 10000 false scaffold01071: 169366-179365 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314295 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain