Gene : Cucsa.139700 C. sativus v1.0
Defline:  (1 of 2) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  102
Name:  ? Cucsa.139700 Secondary Identifier:  ? PAC:16963406
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYOXYLATE-BYPASS Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus PWY-561 Cucumis sativus pathologic  
Csativus PWY-5690 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.139700 0.5kb upstream 0.5kb upstream 5126 true scaffold01066: 989830-994955 Cucumis sativus
Cucsa.139700 0.5kb upstream 0.5kb upstream 500 false scaffold01066: 989830-990329 Cucumis sativus
Cucsa.139700 0.5kb downstream 0.5kb downstream 5126 true scaffold01066: 990330-995455 Cucumis sativus
Cucsa.139700 0.5kb downstream 0.5kb downstream 500 false scaffold01066: 994956-995455 Cucumis sativus
Cucsa.139700 1.0kb upstream 1.0kb upstream 5626 true scaffold01066: 989330-994955 Cucumis sativus
Cucsa.139700 1.0kb upstream 1.0kb upstream 1000 false scaffold01066: 989330-990329 Cucumis sativus
Cucsa.139700 1.0kb downstream 1.0kb downstream 5626 true scaffold01066: 990330-995955 Cucumis sativus
Cucsa.139700 1.0kb downstream 1.0kb downstream 1000 false scaffold01066: 994956-995955 Cucumis sativus
Cucsa.139700 2.0kb upstream 2.0kb upstream 6626 true scaffold01066: 988330-994955 Cucumis sativus
Cucsa.139700 2.0kb upstream 2.0kb upstream 2000 false scaffold01066: 988330-990329 Cucumis sativus
Cucsa.139700 2.0kb downstream 2.0kb downstream 6626 true scaffold01066: 990330-996955 Cucumis sativus
Cucsa.139700 2.0kb downstream 2.0kb downstream 2000 false scaffold01066: 994956-996955 Cucumis sativus
Cucsa.139700 5.0kb upstream 5.0kb upstream 9626 true scaffold01066: 985330-994955 Cucumis sativus
Cucsa.139700 5.0kb upstream 5.0kb upstream 5000 false scaffold01066: 985330-990329 Cucumis sativus
Cucsa.139700 5.0kb downstream 5.0kb downstream 9626 true scaffold01066: 990330-999955 Cucumis sativus
Cucsa.139700 5.0kb downstream 5.0kb downstream 5000 false scaffold01066: 994956-999955 Cucumis sativus
Cucsa.139700 10.0kb upstream 10.0kb upstream 14626 true scaffold01066: 980330-994955 Cucumis sativus
Cucsa.139700 10.0kb upstream 10.0kb upstream 10000 false scaffold01066: 980330-990329 Cucumis sativus
Cucsa.139700 10.0kb downstream 10.0kb downstream 14626 true scaffold01066: 990330-1004955 Cucumis sativus
Cucsa.139700 10.0kb downstream 10.0kb downstream 10000 false scaffold01066: 994956-1004955 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309645 5265 Fabidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain