Gene : Cucsa.138820 C. sativus v1.0
Defline:  (1 of 2) PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN Genomic Order:  16
Name:  ? Cucsa.138820 Secondary Identifier:  ? PAC:16963288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.138820 0.5kb upstream 0.5kb upstream 1761 true scaffold01066: 108144-109904 Cucumis sativus
Cucsa.138820 0.5kb upstream 0.5kb upstream 500 false scaffold01066: 109405-109904 Cucumis sativus
Cucsa.138820 0.5kb downstream 0.5kb downstream 1761 true scaffold01066: 107644-109404 Cucumis sativus
Cucsa.138820 0.5kb downstream 0.5kb downstream 500 false scaffold01066: 107644-108143 Cucumis sativus
Cucsa.138820 1.0kb upstream 1.0kb upstream 2261 true scaffold01066: 108144-110404 Cucumis sativus
Cucsa.138820 1.0kb upstream 1.0kb upstream 1000 false scaffold01066: 109405-110404 Cucumis sativus
Cucsa.138820 1.0kb downstream 1.0kb downstream 2261 true scaffold01066: 107144-109404 Cucumis sativus
Cucsa.138820 1.0kb downstream 1.0kb downstream 1000 false scaffold01066: 107144-108143 Cucumis sativus
Cucsa.138820 2.0kb upstream 2.0kb upstream 3261 true scaffold01066: 108144-111404 Cucumis sativus
Cucsa.138820 2.0kb upstream 2.0kb upstream 2000 false scaffold01066: 109405-111404 Cucumis sativus
Cucsa.138820 2.0kb downstream 2.0kb downstream 3261 true scaffold01066: 106144-109404 Cucumis sativus
Cucsa.138820 2.0kb downstream 2.0kb downstream 2000 false scaffold01066: 106144-108143 Cucumis sativus
Cucsa.138820 5.0kb upstream 5.0kb upstream 6261 true scaffold01066: 108144-114404 Cucumis sativus
Cucsa.138820 5.0kb upstream 5.0kb upstream 5000 false scaffold01066: 109405-114404 Cucumis sativus
Cucsa.138820 5.0kb downstream 5.0kb downstream 6261 true scaffold01066: 103144-109404 Cucumis sativus
Cucsa.138820 5.0kb downstream 5.0kb downstream 5000 false scaffold01066: 103144-108143 Cucumis sativus
Cucsa.138820 10.0kb upstream 10.0kb upstream 11261 true scaffold01066: 108144-119404 Cucumis sativus
Cucsa.138820 10.0kb upstream 10.0kb upstream 10000 false scaffold01066: 109405-119404 Cucumis sativus
Cucsa.138820 10.0kb downstream 10.0kb downstream 11261 true scaffold01066: 98144-109404 Cucumis sativus
Cucsa.138820 10.0kb downstream 10.0kb downstream 10000 false scaffold01066: 98144-108143 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312857 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain