Gene : Cucsa.130500 C. sativus v1.0
Defline:  (1 of 6) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  49
Name:  ? Cucsa.130500 Secondary Identifier:  ? PAC:16962398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.130500 0.5kb upstream 0.5kb upstream 5060 true scaffold01029: 579870-584929 Cucumis sativus
Cucsa.130500 0.5kb upstream 0.5kb upstream 500 false scaffold01029: 579870-580369 Cucumis sativus
Cucsa.130500 0.5kb downstream 0.5kb downstream 5060 true scaffold01029: 580370-585429 Cucumis sativus
Cucsa.130500 0.5kb downstream 0.5kb downstream 500 false scaffold01029: 584930-585429 Cucumis sativus
Cucsa.130500 1.0kb upstream 1.0kb upstream 5560 true scaffold01029: 579370-584929 Cucumis sativus
Cucsa.130500 1.0kb upstream 1.0kb upstream 1000 false scaffold01029: 579370-580369 Cucumis sativus
Cucsa.130500 1.0kb downstream 1.0kb downstream 5560 true scaffold01029: 580370-585929 Cucumis sativus
Cucsa.130500 1.0kb downstream 1.0kb downstream 1000 false scaffold01029: 584930-585929 Cucumis sativus
Cucsa.130500 2.0kb upstream 2.0kb upstream 6560 true scaffold01029: 578370-584929 Cucumis sativus
Cucsa.130500 2.0kb upstream 2.0kb upstream 2000 false scaffold01029: 578370-580369 Cucumis sativus
Cucsa.130500 2.0kb downstream 2.0kb downstream 6560 true scaffold01029: 580370-586929 Cucumis sativus
Cucsa.130500 2.0kb downstream 2.0kb downstream 2000 false scaffold01029: 584930-586929 Cucumis sativus
Cucsa.130500 5.0kb upstream 5.0kb upstream 9560 true scaffold01029: 575370-584929 Cucumis sativus
Cucsa.130500 5.0kb upstream 5.0kb upstream 5000 false scaffold01029: 575370-580369 Cucumis sativus
Cucsa.130500 5.0kb downstream 5.0kb downstream 9560 true scaffold01029: 580370-589929 Cucumis sativus
Cucsa.130500 5.0kb downstream 5.0kb downstream 5000 false scaffold01029: 584930-589929 Cucumis sativus
Cucsa.130500 10.0kb upstream 10.0kb upstream 14560 true scaffold01029: 570370-584929 Cucumis sativus
Cucsa.130500 10.0kb upstream 10.0kb upstream 10000 false scaffold01029: 570370-580369 Cucumis sativus
Cucsa.130500 10.0kb downstream 10.0kb downstream 14560 true scaffold01029: 580370-594929 Cucumis sativus
Cucsa.130500 10.0kb downstream 10.0kb downstream 10000 false scaffold01029: 584930-594929 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301877 5265 Fabidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain