Gene : Cucsa.130000 C. sativus v1.0
Defline:  (1 of 2) PTHR18968:SF121 - PYRUVATE DECARBOXYLASE 1-RELATED Genomic Order:  2
Name:  ? Cucsa.130000 Secondary Identifier:  ? PAC:16962339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5486 Cucumis sativus pathologic  
Csativus PWY-6330 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.130000 0.5kb upstream 0.5kb upstream 4120 true scaffold01029: 2850-6969 Cucumis sativus
Cucsa.130000 0.5kb upstream 0.5kb upstream 500 false scaffold01029: 2850-3349 Cucumis sativus
Cucsa.130000 0.5kb downstream 0.5kb downstream 4120 true scaffold01029: 3350-7469 Cucumis sativus
Cucsa.130000 0.5kb downstream 0.5kb downstream 500 false scaffold01029: 6970-7469 Cucumis sativus
Cucsa.130000 1.0kb upstream 1.0kb upstream 4620 true scaffold01029: 2350-6969 Cucumis sativus
Cucsa.130000 1.0kb upstream 1.0kb upstream 1000 false scaffold01029: 2350-3349 Cucumis sativus
Cucsa.130000 1.0kb downstream 1.0kb downstream 4620 true scaffold01029: 3350-7969 Cucumis sativus
Cucsa.130000 1.0kb downstream 1.0kb downstream 1000 false scaffold01029: 6970-7969 Cucumis sativus
Cucsa.130000 2.0kb upstream 2.0kb upstream 5620 true scaffold01029: 1350-6969 Cucumis sativus
Cucsa.130000 2.0kb upstream 2.0kb upstream 2000 false scaffold01029: 1350-3349 Cucumis sativus
Cucsa.130000 2.0kb downstream 2.0kb downstream 5620 true scaffold01029: 3350-8969 Cucumis sativus
Cucsa.130000 2.0kb downstream 2.0kb downstream 2000 false scaffold01029: 6970-8969 Cucumis sativus
Cucsa.130000 5.0kb upstream 5.0kb upstream 6969 true scaffold01029: 1-6969 Cucumis sativus
Cucsa.130000 5.0kb upstream 5.0kb upstream 3349 false scaffold01029: 1-3349 Cucumis sativus
Cucsa.130000 5.0kb downstream 5.0kb downstream 8620 true scaffold01029: 3350-11969 Cucumis sativus
Cucsa.130000 5.0kb downstream 5.0kb downstream 5000 false scaffold01029: 6970-11969 Cucumis sativus
Cucsa.130000 10.0kb upstream 10.0kb upstream 6969 true scaffold01029: 1-6969 Cucumis sativus
Cucsa.130000 10.0kb upstream 10.0kb upstream 3349 false scaffold01029: 1-3349 Cucumis sativus
Cucsa.130000 10.0kb downstream 10.0kb downstream 13620 true scaffold01029: 3350-16969 Cucumis sativus
Cucsa.130000 10.0kb downstream 10.0kb downstream 10000 false scaffold01029: 6970-16969 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606541 5273 Angiosperm View MSA
122236811 5265 Fabidae View MSA
123983021 5270 Rosid View MSA
123558695 5271 Pentapetalae View MSA
122593509 5272 Eudicot View MSA
120878831 5274 Embryophyte View MSA
122919720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain