Gene : Cucsa.129320 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  48
Name:  ? Cucsa.129320 Secondary Identifier:  ? PAC:16962264
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.129320 0.5kb upstream 0.5kb upstream 1769 true scaffold01028: 301838-303606 Cucumis sativus
Cucsa.129320 0.5kb upstream 0.5kb upstream 500 false scaffold01028: 301838-302337 Cucumis sativus
Cucsa.129320 0.5kb downstream 0.5kb downstream 1769 true scaffold01028: 302338-304106 Cucumis sativus
Cucsa.129320 0.5kb downstream 0.5kb downstream 500 false scaffold01028: 303607-304106 Cucumis sativus
Cucsa.129320 1.0kb upstream 1.0kb upstream 2269 true scaffold01028: 301338-303606 Cucumis sativus
Cucsa.129320 1.0kb upstream 1.0kb upstream 1000 false scaffold01028: 301338-302337 Cucumis sativus
Cucsa.129320 1.0kb downstream 1.0kb downstream 2269 true scaffold01028: 302338-304606 Cucumis sativus
Cucsa.129320 1.0kb downstream 1.0kb downstream 1000 false scaffold01028: 303607-304606 Cucumis sativus
Cucsa.129320 2.0kb upstream 2.0kb upstream 3269 true scaffold01028: 300338-303606 Cucumis sativus
Cucsa.129320 2.0kb upstream 2.0kb upstream 2000 false scaffold01028: 300338-302337 Cucumis sativus
Cucsa.129320 2.0kb downstream 2.0kb downstream 3269 true scaffold01028: 302338-305606 Cucumis sativus
Cucsa.129320 2.0kb downstream 2.0kb downstream 2000 false scaffold01028: 303607-305606 Cucumis sativus
Cucsa.129320 5.0kb upstream 5.0kb upstream 6269 true scaffold01028: 297338-303606 Cucumis sativus
Cucsa.129320 5.0kb upstream 5.0kb upstream 5000 false scaffold01028: 297338-302337 Cucumis sativus
Cucsa.129320 5.0kb downstream 5.0kb downstream 6269 true scaffold01028: 302338-308606 Cucumis sativus
Cucsa.129320 5.0kb downstream 5.0kb downstream 5000 false scaffold01028: 303607-308606 Cucumis sativus
Cucsa.129320 10.0kb upstream 10.0kb upstream 11269 true scaffold01028: 292338-303606 Cucumis sativus
Cucsa.129320 10.0kb upstream 10.0kb upstream 10000 false scaffold01028: 292338-302337 Cucumis sativus
Cucsa.129320 10.0kb downstream 10.0kb downstream 11269 true scaffold01028: 302338-313606 Cucumis sativus
Cucsa.129320 10.0kb downstream 10.0kb downstream 10000 false scaffold01028: 303607-313606 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314182 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain