Gene : Cucsa.128440 C. sativus v1.0
Defline:  (1 of 1) PTHR12998:SF0 - TRNA:M(4)X MODIFICATION ENZYME TRM13 HOMOLOG Genomic Order:  62
Name:  ? Cucsa.128440 Secondary Identifier:  ? PAC:16962173
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6829 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.128440 0.5kb upstream 0.5kb upstream 2970 true scaffold01024: 460938-463907 Cucumis sativus
Cucsa.128440 0.5kb upstream 0.5kb upstream 500 false scaffold01024: 463408-463907 Cucumis sativus
Cucsa.128440 0.5kb downstream 0.5kb downstream 2970 true scaffold01024: 460438-463407 Cucumis sativus
Cucsa.128440 0.5kb downstream 0.5kb downstream 500 false scaffold01024: 460438-460937 Cucumis sativus
Cucsa.128440 1.0kb upstream 1.0kb upstream 3470 true scaffold01024: 460938-464407 Cucumis sativus
Cucsa.128440 1.0kb upstream 1.0kb upstream 1000 false scaffold01024: 463408-464407 Cucumis sativus
Cucsa.128440 1.0kb downstream 1.0kb downstream 3470 true scaffold01024: 459938-463407 Cucumis sativus
Cucsa.128440 1.0kb downstream 1.0kb downstream 1000 false scaffold01024: 459938-460937 Cucumis sativus
Cucsa.128440 2.0kb upstream 2.0kb upstream 4470 true scaffold01024: 460938-465407 Cucumis sativus
Cucsa.128440 2.0kb upstream 2.0kb upstream 2000 false scaffold01024: 463408-465407 Cucumis sativus
Cucsa.128440 2.0kb downstream 2.0kb downstream 4470 true scaffold01024: 458938-463407 Cucumis sativus
Cucsa.128440 2.0kb downstream 2.0kb downstream 2000 false scaffold01024: 458938-460937 Cucumis sativus
Cucsa.128440 5.0kb upstream 5.0kb upstream 7470 true scaffold01024: 460938-468407 Cucumis sativus
Cucsa.128440 5.0kb upstream 5.0kb upstream 5000 false scaffold01024: 463408-468407 Cucumis sativus
Cucsa.128440 5.0kb downstream 5.0kb downstream 7470 true scaffold01024: 455938-463407 Cucumis sativus
Cucsa.128440 5.0kb downstream 5.0kb downstream 5000 false scaffold01024: 455938-460937 Cucumis sativus
Cucsa.128440 10.0kb upstream 10.0kb upstream 12470 true scaffold01024: 460938-473407 Cucumis sativus
Cucsa.128440 10.0kb upstream 10.0kb upstream 10000 false scaffold01024: 463408-473407 Cucumis sativus
Cucsa.128440 10.0kb downstream 10.0kb downstream 12470 true scaffold01024: 450938-463407 Cucumis sativus
Cucsa.128440 10.0kb downstream 10.0kb downstream 10000 false scaffold01024: 450938-460937 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307487 5265 Fabidae View MSA
124062140 5270 Rosid View MSA
123739890 5271 Pentapetalae View MSA
122785784 5272 Eudicot View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain