Gene : Cucsa.128570 C. sativus v1.0
Defline:  (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  75
Name:  ? Cucsa.128570 Secondary Identifier:  ? PAC:16962191
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.128570 0.5kb upstream 0.5kb upstream 2460 true scaffold01024: 544904-547363 Cucumis sativus
Cucsa.128570 0.5kb upstream 0.5kb upstream 500 false scaffold01024: 544904-545403 Cucumis sativus
Cucsa.128570 0.5kb downstream 0.5kb downstream 2460 true scaffold01024: 545404-547863 Cucumis sativus
Cucsa.128570 0.5kb downstream 0.5kb downstream 500 false scaffold01024: 547364-547863 Cucumis sativus
Cucsa.128570 1.0kb upstream 1.0kb upstream 2960 true scaffold01024: 544404-547363 Cucumis sativus
Cucsa.128570 1.0kb upstream 1.0kb upstream 1000 false scaffold01024: 544404-545403 Cucumis sativus
Cucsa.128570 1.0kb downstream 1.0kb downstream 2960 true scaffold01024: 545404-548363 Cucumis sativus
Cucsa.128570 1.0kb downstream 1.0kb downstream 1000 false scaffold01024: 547364-548363 Cucumis sativus
Cucsa.128570 2.0kb upstream 2.0kb upstream 3960 true scaffold01024: 543404-547363 Cucumis sativus
Cucsa.128570 2.0kb upstream 2.0kb upstream 2000 false scaffold01024: 543404-545403 Cucumis sativus
Cucsa.128570 2.0kb downstream 2.0kb downstream 3960 true scaffold01024: 545404-549363 Cucumis sativus
Cucsa.128570 2.0kb downstream 2.0kb downstream 2000 false scaffold01024: 547364-549363 Cucumis sativus
Cucsa.128570 5.0kb upstream 5.0kb upstream 6960 true scaffold01024: 540404-547363 Cucumis sativus
Cucsa.128570 5.0kb upstream 5.0kb upstream 5000 false scaffold01024: 540404-545403 Cucumis sativus
Cucsa.128570 5.0kb downstream 5.0kb downstream 6960 true scaffold01024: 545404-552363 Cucumis sativus
Cucsa.128570 5.0kb downstream 5.0kb downstream 5000 false scaffold01024: 547364-552363 Cucumis sativus
Cucsa.128570 10.0kb upstream 10.0kb upstream 11960 true scaffold01024: 535404-547363 Cucumis sativus
Cucsa.128570 10.0kb upstream 10.0kb upstream 10000 false scaffold01024: 535404-545403 Cucumis sativus
Cucsa.128570 10.0kb downstream 10.0kb downstream 11960 true scaffold01024: 545404-557363 Cucumis sativus
Cucsa.128570 10.0kb downstream 10.0kb downstream 10000 false scaffold01024: 547364-557363 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312422 5265 Fabidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain