Gene : Cucsa.127930 C. sativus v1.0
Defline:  (1 of 2) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  11
Name:  ? Cucsa.127930 Secondary Identifier:  ? PAC:16962103
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.127930 0.5kb upstream 0.5kb upstream 5922 true scaffold01024: 76255-82176 Cucumis sativus
Cucsa.127930 0.5kb upstream 0.5kb upstream 500 false scaffold01024: 76255-76754 Cucumis sativus
Cucsa.127930 0.5kb downstream 0.5kb downstream 5922 true scaffold01024: 76755-82676 Cucumis sativus
Cucsa.127930 0.5kb downstream 0.5kb downstream 500 false scaffold01024: 82177-82676 Cucumis sativus
Cucsa.127930 1.0kb upstream 1.0kb upstream 6422 true scaffold01024: 75755-82176 Cucumis sativus
Cucsa.127930 1.0kb upstream 1.0kb upstream 1000 false scaffold01024: 75755-76754 Cucumis sativus
Cucsa.127930 1.0kb downstream 1.0kb downstream 6422 true scaffold01024: 76755-83176 Cucumis sativus
Cucsa.127930 1.0kb downstream 1.0kb downstream 1000 false scaffold01024: 82177-83176 Cucumis sativus
Cucsa.127930 2.0kb upstream 2.0kb upstream 7422 true scaffold01024: 74755-82176 Cucumis sativus
Cucsa.127930 2.0kb upstream 2.0kb upstream 2000 false scaffold01024: 74755-76754 Cucumis sativus
Cucsa.127930 2.0kb downstream 2.0kb downstream 7422 true scaffold01024: 76755-84176 Cucumis sativus
Cucsa.127930 2.0kb downstream 2.0kb downstream 2000 false scaffold01024: 82177-84176 Cucumis sativus
Cucsa.127930 5.0kb upstream 5.0kb upstream 10422 true scaffold01024: 71755-82176 Cucumis sativus
Cucsa.127930 5.0kb upstream 5.0kb upstream 5000 false scaffold01024: 71755-76754 Cucumis sativus
Cucsa.127930 5.0kb downstream 5.0kb downstream 10422 true scaffold01024: 76755-87176 Cucumis sativus
Cucsa.127930 5.0kb downstream 5.0kb downstream 5000 false scaffold01024: 82177-87176 Cucumis sativus
Cucsa.127930 10.0kb upstream 10.0kb upstream 15422 true scaffold01024: 66755-82176 Cucumis sativus
Cucsa.127930 10.0kb upstream 10.0kb upstream 10000 false scaffold01024: 66755-76754 Cucumis sativus
Cucsa.127930 10.0kb downstream 10.0kb downstream 15422 true scaffold01024: 76755-92176 Cucumis sativus
Cucsa.127930 10.0kb downstream 10.0kb downstream 10000 false scaffold01024: 82177-92176 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311681 5265 Fabidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain