Gene : Cucsa.133250 C. sativus v1.0
Defline:  (1 of 1) PTHR31734:SF28 - AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  139
Name:  ? Cucsa.133250 Secondary Identifier:  ? PAC:16962695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.133250 0.5kb upstream 0.5kb upstream 4801 true scaffold01037: 973351-978151 Cucumis sativus
Cucsa.133250 0.5kb upstream 0.5kb upstream 500 false scaffold01037: 977652-978151 Cucumis sativus
Cucsa.133250 0.5kb downstream 0.5kb downstream 4801 true scaffold01037: 972851-977651 Cucumis sativus
Cucsa.133250 0.5kb downstream 0.5kb downstream 500 false scaffold01037: 972851-973350 Cucumis sativus
Cucsa.133250 1.0kb upstream 1.0kb upstream 5301 true scaffold01037: 973351-978651 Cucumis sativus
Cucsa.133250 1.0kb upstream 1.0kb upstream 1000 false scaffold01037: 977652-978651 Cucumis sativus
Cucsa.133250 1.0kb downstream 1.0kb downstream 5301 true scaffold01037: 972351-977651 Cucumis sativus
Cucsa.133250 1.0kb downstream 1.0kb downstream 1000 false scaffold01037: 972351-973350 Cucumis sativus
Cucsa.133250 2.0kb upstream 2.0kb upstream 6301 true scaffold01037: 973351-979651 Cucumis sativus
Cucsa.133250 2.0kb upstream 2.0kb upstream 2000 false scaffold01037: 977652-979651 Cucumis sativus
Cucsa.133250 2.0kb downstream 2.0kb downstream 6301 true scaffold01037: 971351-977651 Cucumis sativus
Cucsa.133250 2.0kb downstream 2.0kb downstream 2000 false scaffold01037: 971351-973350 Cucumis sativus
Cucsa.133250 5.0kb upstream 5.0kb upstream 9301 true scaffold01037: 973351-982651 Cucumis sativus
Cucsa.133250 5.0kb upstream 5.0kb upstream 5000 false scaffold01037: 977652-982651 Cucumis sativus
Cucsa.133250 5.0kb downstream 5.0kb downstream 9301 true scaffold01037: 968351-977651 Cucumis sativus
Cucsa.133250 5.0kb downstream 5.0kb downstream 5000 false scaffold01037: 968351-973350 Cucumis sativus
Cucsa.133250 10.0kb upstream 10.0kb upstream 14301 true scaffold01037: 973351-987651 Cucumis sativus
Cucsa.133250 10.0kb upstream 10.0kb upstream 10000 false scaffold01037: 977652-987651 Cucumis sativus
Cucsa.133250 10.0kb downstream 10.0kb downstream 14301 true scaffold01037: 963351-977651 Cucumis sativus
Cucsa.133250 10.0kb downstream 10.0kb downstream 10000 false scaffold01037: 963351-973350 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603151 5273 Angiosperm Singleton cluster - no MSA
122233398 5265 Fabidae Singleton cluster - no MSA
123979626 5270 Rosid Singleton cluster - no MSA
123555303 5271 Pentapetalae Singleton cluster - no MSA
122590117 5272 Eudicot Singleton cluster - no MSA
120875441 5274 Embryophyte Singleton cluster - no MSA
122916332 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain