Gene : Cucsa.132890 C. sativus v1.0
Defline:  (1 of 3) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  103
Name:  ? Cucsa.132890 Secondary Identifier:  ? PAC:16962630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.132890 0.5kb upstream 0.5kb upstream 1035 true scaffold01037: 734676-735710 Cucumis sativus
Cucsa.132890 0.5kb upstream 0.5kb upstream 500 false scaffold01037: 735211-735710 Cucumis sativus
Cucsa.132890 0.5kb downstream 0.5kb downstream 1035 true scaffold01037: 734176-735210 Cucumis sativus
Cucsa.132890 0.5kb downstream 0.5kb downstream 500 false scaffold01037: 734176-734675 Cucumis sativus
Cucsa.132890 1.0kb upstream 1.0kb upstream 1535 true scaffold01037: 734676-736210 Cucumis sativus
Cucsa.132890 1.0kb upstream 1.0kb upstream 1000 false scaffold01037: 735211-736210 Cucumis sativus
Cucsa.132890 1.0kb downstream 1.0kb downstream 1535 true scaffold01037: 733676-735210 Cucumis sativus
Cucsa.132890 1.0kb downstream 1.0kb downstream 1000 false scaffold01037: 733676-734675 Cucumis sativus
Cucsa.132890 2.0kb upstream 2.0kb upstream 2535 true scaffold01037: 734676-737210 Cucumis sativus
Cucsa.132890 2.0kb upstream 2.0kb upstream 2000 false scaffold01037: 735211-737210 Cucumis sativus
Cucsa.132890 2.0kb downstream 2.0kb downstream 2535 true scaffold01037: 732676-735210 Cucumis sativus
Cucsa.132890 2.0kb downstream 2.0kb downstream 2000 false scaffold01037: 732676-734675 Cucumis sativus
Cucsa.132890 5.0kb upstream 5.0kb upstream 5535 true scaffold01037: 734676-740210 Cucumis sativus
Cucsa.132890 5.0kb upstream 5.0kb upstream 5000 false scaffold01037: 735211-740210 Cucumis sativus
Cucsa.132890 5.0kb downstream 5.0kb downstream 5535 true scaffold01037: 729676-735210 Cucumis sativus
Cucsa.132890 5.0kb downstream 5.0kb downstream 5000 false scaffold01037: 729676-734675 Cucumis sativus
Cucsa.132890 10.0kb upstream 10.0kb upstream 10535 true scaffold01037: 734676-745210 Cucumis sativus
Cucsa.132890 10.0kb upstream 10.0kb upstream 10000 false scaffold01037: 735211-745210 Cucumis sativus
Cucsa.132890 10.0kb downstream 10.0kb downstream 10535 true scaffold01037: 724676-735210 Cucumis sativus
Cucsa.132890 10.0kb downstream 10.0kb downstream 10000 false scaffold01037: 724676-734675 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307412 5265 Fabidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain