Gene : Cucsa.133690 C. sativus v1.0
Defline:  (1 of 1) PF00432//PF13249 - Prenyltransferase and squalene oxidase repeat (Prenyltrans) // Squalene-hopene cyclase N-terminal domain (SQHop_cyclase_N) Genomic Order:  183
Name:  ? Cucsa.133690 Secondary Identifier:  ? PAC:16962770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.133690 0.5kb upstream 0.5kb upstream 6981 true scaffold01037: 1353063-1360043 Cucumis sativus
Cucsa.133690 0.5kb upstream 0.5kb upstream 500 false scaffold01037: 1359544-1360043 Cucumis sativus
Cucsa.133690 0.5kb downstream 0.5kb downstream 6981 true scaffold01037: 1352563-1359543 Cucumis sativus
Cucsa.133690 0.5kb downstream 0.5kb downstream 500 false scaffold01037: 1352563-1353062 Cucumis sativus
Cucsa.133690 1.0kb upstream 1.0kb upstream 7481 true scaffold01037: 1353063-1360543 Cucumis sativus
Cucsa.133690 1.0kb upstream 1.0kb upstream 1000 false scaffold01037: 1359544-1360543 Cucumis sativus
Cucsa.133690 1.0kb downstream 1.0kb downstream 7481 true scaffold01037: 1352063-1359543 Cucumis sativus
Cucsa.133690 1.0kb downstream 1.0kb downstream 1000 false scaffold01037: 1352063-1353062 Cucumis sativus
Cucsa.133690 2.0kb upstream 2.0kb upstream 8481 true scaffold01037: 1353063-1361543 Cucumis sativus
Cucsa.133690 2.0kb upstream 2.0kb upstream 2000 false scaffold01037: 1359544-1361543 Cucumis sativus
Cucsa.133690 2.0kb downstream 2.0kb downstream 8481 true scaffold01037: 1351063-1359543 Cucumis sativus
Cucsa.133690 2.0kb downstream 2.0kb downstream 2000 false scaffold01037: 1351063-1353062 Cucumis sativus
Cucsa.133690 5.0kb upstream 5.0kb upstream 11481 true scaffold01037: 1353063-1364543 Cucumis sativus
Cucsa.133690 5.0kb upstream 5.0kb upstream 5000 false scaffold01037: 1359544-1364543 Cucumis sativus
Cucsa.133690 5.0kb downstream 5.0kb downstream 11481 true scaffold01037: 1348063-1359543 Cucumis sativus
Cucsa.133690 5.0kb downstream 5.0kb downstream 5000 false scaffold01037: 1348063-1353062 Cucumis sativus
Cucsa.133690 10.0kb upstream 10.0kb upstream 16481 true scaffold01037: 1353063-1369543 Cucumis sativus
Cucsa.133690 10.0kb upstream 10.0kb upstream 10000 false scaffold01037: 1359544-1369543 Cucumis sativus
Cucsa.133690 10.0kb downstream 10.0kb downstream 16481 true scaffold01037: 1343063-1359543 Cucumis sativus
Cucsa.133690 10.0kb downstream 10.0kb downstream 10000 false scaffold01037: 1343063-1353062 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122308588 5265 Fabidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain