Gene : Cucsa.158300 C. sativus v1.0
Defline:  (1 of 1) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  58
Name:  ? Cucsa.158300 Secondary Identifier:  ? PAC:16965105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158300 0.5kb upstream 0.5kb upstream 3616 true scaffold01142: 412047-415662 Cucumis sativus
Cucsa.158300 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 412047-412546 Cucumis sativus
Cucsa.158300 0.5kb downstream 0.5kb downstream 3616 true scaffold01142: 412547-416162 Cucumis sativus
Cucsa.158300 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 415663-416162 Cucumis sativus
Cucsa.158300 1.0kb upstream 1.0kb upstream 4116 true scaffold01142: 411547-415662 Cucumis sativus
Cucsa.158300 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 411547-412546 Cucumis sativus
Cucsa.158300 1.0kb downstream 1.0kb downstream 4116 true scaffold01142: 412547-416662 Cucumis sativus
Cucsa.158300 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 415663-416662 Cucumis sativus
Cucsa.158300 2.0kb upstream 2.0kb upstream 5116 true scaffold01142: 410547-415662 Cucumis sativus
Cucsa.158300 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 410547-412546 Cucumis sativus
Cucsa.158300 2.0kb downstream 2.0kb downstream 5116 true scaffold01142: 412547-417662 Cucumis sativus
Cucsa.158300 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 415663-417662 Cucumis sativus
Cucsa.158300 5.0kb upstream 5.0kb upstream 8116 true scaffold01142: 407547-415662 Cucumis sativus
Cucsa.158300 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 407547-412546 Cucumis sativus
Cucsa.158300 5.0kb downstream 5.0kb downstream 8116 true scaffold01142: 412547-420662 Cucumis sativus
Cucsa.158300 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 415663-420662 Cucumis sativus
Cucsa.158300 10.0kb upstream 10.0kb upstream 13116 true scaffold01142: 402547-415662 Cucumis sativus
Cucsa.158300 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 402547-412546 Cucumis sativus
Cucsa.158300 10.0kb downstream 10.0kb downstream 13116 true scaffold01142: 412547-425662 Cucumis sativus
Cucsa.158300 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 415663-425662 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300352 5265 Fabidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain