Gene : Cucsa.158270 C. sativus v1.0
Defline:  (1 of 3) PTHR12281 - RP42 RELATED Genomic Order:  55
Name:  ? Cucsa.158270 Secondary Identifier:  ? PAC:16965101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158270 0.5kb upstream 0.5kb upstream 5385 true scaffold01142: 397268-402652 Cucumis sativus
Cucsa.158270 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 397268-397767 Cucumis sativus
Cucsa.158270 0.5kb downstream 0.5kb downstream 5385 true scaffold01142: 397768-403152 Cucumis sativus
Cucsa.158270 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 402653-403152 Cucumis sativus
Cucsa.158270 1.0kb upstream 1.0kb upstream 5885 true scaffold01142: 396768-402652 Cucumis sativus
Cucsa.158270 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 396768-397767 Cucumis sativus
Cucsa.158270 1.0kb downstream 1.0kb downstream 5885 true scaffold01142: 397768-403652 Cucumis sativus
Cucsa.158270 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 402653-403652 Cucumis sativus
Cucsa.158270 2.0kb upstream 2.0kb upstream 6885 true scaffold01142: 395768-402652 Cucumis sativus
Cucsa.158270 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 395768-397767 Cucumis sativus
Cucsa.158270 2.0kb downstream 2.0kb downstream 6885 true scaffold01142: 397768-404652 Cucumis sativus
Cucsa.158270 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 402653-404652 Cucumis sativus
Cucsa.158270 5.0kb upstream 5.0kb upstream 9885 true scaffold01142: 392768-402652 Cucumis sativus
Cucsa.158270 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 392768-397767 Cucumis sativus
Cucsa.158270 5.0kb downstream 5.0kb downstream 9885 true scaffold01142: 397768-407652 Cucumis sativus
Cucsa.158270 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 402653-407652 Cucumis sativus
Cucsa.158270 10.0kb upstream 10.0kb upstream 14885 true scaffold01142: 387768-402652 Cucumis sativus
Cucsa.158270 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 387768-397767 Cucumis sativus
Cucsa.158270 10.0kb downstream 10.0kb downstream 14885 true scaffold01142: 397768-412652 Cucumis sativus
Cucsa.158270 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 402653-412652 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305244 5265 Fabidae View MSA
124067795 5270 Rosid View MSA
123739040 5271 Pentapetalae View MSA
122788388 5272 Eudicot View MSA
122049788 5273 Angiosperm View MSA
121347984 5274 Embryophyte View MSA
123426015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain