Gene : Cucsa.158020 C. sativus v1.0
Defline:  (1 of 1) PTHR12899:SF9 - EXPRESSED PROTEIN Genomic Order:  30
Name:  ? Cucsa.158020 Secondary Identifier:  ? PAC:16965063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158020 0.5kb upstream 0.5kb upstream 3849 true scaffold01142: 181227-185075 Cucumis sativus
Cucsa.158020 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 181227-181726 Cucumis sativus
Cucsa.158020 0.5kb downstream 0.5kb downstream 3849 true scaffold01142: 181727-185575 Cucumis sativus
Cucsa.158020 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 185076-185575 Cucumis sativus
Cucsa.158020 1.0kb upstream 1.0kb upstream 4349 true scaffold01142: 180727-185075 Cucumis sativus
Cucsa.158020 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 180727-181726 Cucumis sativus
Cucsa.158020 1.0kb downstream 1.0kb downstream 4349 true scaffold01142: 181727-186075 Cucumis sativus
Cucsa.158020 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 185076-186075 Cucumis sativus
Cucsa.158020 2.0kb upstream 2.0kb upstream 5349 true scaffold01142: 179727-185075 Cucumis sativus
Cucsa.158020 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 179727-181726 Cucumis sativus
Cucsa.158020 2.0kb downstream 2.0kb downstream 5349 true scaffold01142: 181727-187075 Cucumis sativus
Cucsa.158020 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 185076-187075 Cucumis sativus
Cucsa.158020 5.0kb upstream 5.0kb upstream 8349 true scaffold01142: 176727-185075 Cucumis sativus
Cucsa.158020 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 176727-181726 Cucumis sativus
Cucsa.158020 5.0kb downstream 5.0kb downstream 8349 true scaffold01142: 181727-190075 Cucumis sativus
Cucsa.158020 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 185076-190075 Cucumis sativus
Cucsa.158020 10.0kb upstream 10.0kb upstream 13349 true scaffold01142: 171727-185075 Cucumis sativus
Cucsa.158020 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 171727-181726 Cucumis sativus
Cucsa.158020 10.0kb downstream 10.0kb downstream 13349 true scaffold01142: 181727-195075 Cucumis sativus
Cucsa.158020 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 185076-195075 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306570 5265 Fabidae View MSA
124063027 5270 Rosid View MSA
123744387 5271 Pentapetalae View MSA
122788355 5272 Eudicot View MSA
122047146 5273 Angiosperm View MSA
121310695 5274 Embryophyte View MSA
123348119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain