Gene : Cucsa.155410 C. sativus v1.0
Defline:  (1 of 2) PF04827 - Plant transposon protein (Plant_tran) Genomic Order:  20
Name:  ? Cucsa.155410 Secondary Identifier:  ? PAC:16964770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.155410 0.5kb upstream 0.5kb upstream 2383 true scaffold01136: 187473-189855 Cucumis sativus
Cucsa.155410 0.5kb upstream 0.5kb upstream 500 false scaffold01136: 187473-187972 Cucumis sativus
Cucsa.155410 0.5kb downstream 0.5kb downstream 2383 true scaffold01136: 187973-190355 Cucumis sativus
Cucsa.155410 0.5kb downstream 0.5kb downstream 500 false scaffold01136: 189856-190355 Cucumis sativus
Cucsa.155410 1.0kb upstream 1.0kb upstream 2883 true scaffold01136: 186973-189855 Cucumis sativus
Cucsa.155410 1.0kb upstream 1.0kb upstream 1000 false scaffold01136: 186973-187972 Cucumis sativus
Cucsa.155410 1.0kb downstream 1.0kb downstream 2883 true scaffold01136: 187973-190855 Cucumis sativus
Cucsa.155410 1.0kb downstream 1.0kb downstream 1000 false scaffold01136: 189856-190855 Cucumis sativus
Cucsa.155410 2.0kb upstream 2.0kb upstream 3883 true scaffold01136: 185973-189855 Cucumis sativus
Cucsa.155410 2.0kb upstream 2.0kb upstream 2000 false scaffold01136: 185973-187972 Cucumis sativus
Cucsa.155410 2.0kb downstream 2.0kb downstream 3883 true scaffold01136: 187973-191855 Cucumis sativus
Cucsa.155410 2.0kb downstream 2.0kb downstream 2000 false scaffold01136: 189856-191855 Cucumis sativus
Cucsa.155410 5.0kb upstream 5.0kb upstream 6883 true scaffold01136: 182973-189855 Cucumis sativus
Cucsa.155410 5.0kb upstream 5.0kb upstream 5000 false scaffold01136: 182973-187972 Cucumis sativus
Cucsa.155410 5.0kb downstream 5.0kb downstream 6883 true scaffold01136: 187973-194855 Cucumis sativus
Cucsa.155410 5.0kb downstream 5.0kb downstream 5000 false scaffold01136: 189856-194855 Cucumis sativus
Cucsa.155410 10.0kb upstream 10.0kb upstream 11883 true scaffold01136: 177973-189855 Cucumis sativus
Cucsa.155410 10.0kb upstream 10.0kb upstream 10000 false scaffold01136: 177973-187972 Cucumis sativus
Cucsa.155410 10.0kb downstream 10.0kb downstream 11883 true scaffold01136: 187973-199855 Cucumis sativus
Cucsa.155410 10.0kb downstream 10.0kb downstream 10000 false scaffold01136: 189856-199855 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122236989 5265 Fabidae View MSA
124072686 5270 Rosid View MSA
123741393 5271 Pentapetalae View MSA
122770042 5272 Eudicot View MSA
122051358 5273 Angiosperm View MSA
121345285 5274 Embryophyte View MSA
123380187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain