Gene : Cucsa.153380 C. sativus v1.0
Defline:  (1 of 1) PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE Genomic Order:  81
Name:  ? Cucsa.153380 Secondary Identifier:  ? PAC:16964683
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.153380 0.5kb upstream 0.5kb upstream 3348 true scaffold01124: 505559-508906 Cucumis sativus
Cucsa.153380 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 508407-508906 Cucumis sativus
Cucsa.153380 0.5kb downstream 0.5kb downstream 3348 true scaffold01124: 505059-508406 Cucumis sativus
Cucsa.153380 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 505059-505558 Cucumis sativus
Cucsa.153380 1.0kb upstream 1.0kb upstream 3848 true scaffold01124: 505559-509406 Cucumis sativus
Cucsa.153380 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 508407-509406 Cucumis sativus
Cucsa.153380 1.0kb downstream 1.0kb downstream 3848 true scaffold01124: 504559-508406 Cucumis sativus
Cucsa.153380 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 504559-505558 Cucumis sativus
Cucsa.153380 2.0kb upstream 2.0kb upstream 4848 true scaffold01124: 505559-510406 Cucumis sativus
Cucsa.153380 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 508407-510406 Cucumis sativus
Cucsa.153380 2.0kb downstream 2.0kb downstream 4848 true scaffold01124: 503559-508406 Cucumis sativus
Cucsa.153380 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 503559-505558 Cucumis sativus
Cucsa.153380 5.0kb upstream 5.0kb upstream 7848 true scaffold01124: 505559-513406 Cucumis sativus
Cucsa.153380 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 508407-513406 Cucumis sativus
Cucsa.153380 5.0kb downstream 5.0kb downstream 7848 true scaffold01124: 500559-508406 Cucumis sativus
Cucsa.153380 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 500559-505558 Cucumis sativus
Cucsa.153380 10.0kb upstream 10.0kb upstream 12848 true scaffold01124: 505559-518406 Cucumis sativus
Cucsa.153380 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 508407-518406 Cucumis sativus
Cucsa.153380 10.0kb downstream 10.0kb downstream 12848 true scaffold01124: 495559-508406 Cucumis sativus
Cucsa.153380 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 495559-505558 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237051 5265 Fabidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain