Gene : Cucsa.152710 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.6 - Lysine--tRNA ligase / Lysyl-tRNA synthetase Genomic Order:  14
Name:  ? Cucsa.152710 Secondary Identifier:  ? PAC:16964578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.152710 0.5kb upstream 0.5kb upstream 11813 true scaffold01124: 90837-102649 Cucumis sativus
Cucsa.152710 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 102150-102649 Cucumis sativus
Cucsa.152710 0.5kb downstream 0.5kb downstream 11813 true scaffold01124: 90337-102149 Cucumis sativus
Cucsa.152710 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 90337-90836 Cucumis sativus
Cucsa.152710 1.0kb upstream 1.0kb upstream 12313 true scaffold01124: 90837-103149 Cucumis sativus
Cucsa.152710 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 102150-103149 Cucumis sativus
Cucsa.152710 1.0kb downstream 1.0kb downstream 12313 true scaffold01124: 89837-102149 Cucumis sativus
Cucsa.152710 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 89837-90836 Cucumis sativus
Cucsa.152710 2.0kb upstream 2.0kb upstream 13313 true scaffold01124: 90837-104149 Cucumis sativus
Cucsa.152710 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 102150-104149 Cucumis sativus
Cucsa.152710 2.0kb downstream 2.0kb downstream 13313 true scaffold01124: 88837-102149 Cucumis sativus
Cucsa.152710 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 88837-90836 Cucumis sativus
Cucsa.152710 5.0kb upstream 5.0kb upstream 16313 true scaffold01124: 90837-107149 Cucumis sativus
Cucsa.152710 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 102150-107149 Cucumis sativus
Cucsa.152710 5.0kb downstream 5.0kb downstream 16313 true scaffold01124: 85837-102149 Cucumis sativus
Cucsa.152710 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 85837-90836 Cucumis sativus
Cucsa.152710 10.0kb upstream 10.0kb upstream 21313 true scaffold01124: 90837-112149 Cucumis sativus
Cucsa.152710 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 102150-112149 Cucumis sativus
Cucsa.152710 10.0kb downstream 10.0kb downstream 21313 true scaffold01124: 80837-102149 Cucumis sativus
Cucsa.152710 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 80837-90836 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305134 5265 Fabidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain