Gene : Cucsa.152170 C. sativus v1.0
Defline:  (1 of 2) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Genomic Order:  57
Name:  ? Cucsa.152170 Secondary Identifier:  ? PAC:16964541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.152170 0.5kb upstream 0.5kb upstream 6944 true scaffold01119: 536857-543800 Cucumis sativus
Cucsa.152170 0.5kb upstream 0.5kb upstream 500 false scaffold01119: 543301-543800 Cucumis sativus
Cucsa.152170 0.5kb downstream 0.5kb downstream 6944 true scaffold01119: 536357-543300 Cucumis sativus
Cucsa.152170 0.5kb downstream 0.5kb downstream 500 false scaffold01119: 536357-536856 Cucumis sativus
Cucsa.152170 1.0kb upstream 1.0kb upstream 7444 true scaffold01119: 536857-544300 Cucumis sativus
Cucsa.152170 1.0kb upstream 1.0kb upstream 1000 false scaffold01119: 543301-544300 Cucumis sativus
Cucsa.152170 1.0kb downstream 1.0kb downstream 7444 true scaffold01119: 535857-543300 Cucumis sativus
Cucsa.152170 1.0kb downstream 1.0kb downstream 1000 false scaffold01119: 535857-536856 Cucumis sativus
Cucsa.152170 2.0kb upstream 2.0kb upstream 8409 true scaffold01119: 536857-545265 Cucumis sativus
Cucsa.152170 2.0kb upstream 2.0kb upstream 1965 false scaffold01119: 543301-545265 Cucumis sativus
Cucsa.152170 2.0kb downstream 2.0kb downstream 8444 true scaffold01119: 534857-543300 Cucumis sativus
Cucsa.152170 2.0kb downstream 2.0kb downstream 2000 false scaffold01119: 534857-536856 Cucumis sativus
Cucsa.152170 5.0kb upstream 5.0kb upstream 8409 true scaffold01119: 536857-545265 Cucumis sativus
Cucsa.152170 5.0kb upstream 5.0kb upstream 1965 false scaffold01119: 543301-545265 Cucumis sativus
Cucsa.152170 5.0kb downstream 5.0kb downstream 11444 true scaffold01119: 531857-543300 Cucumis sativus
Cucsa.152170 5.0kb downstream 5.0kb downstream 5000 false scaffold01119: 531857-536856 Cucumis sativus
Cucsa.152170 10.0kb upstream 10.0kb upstream 8409 true scaffold01119: 536857-545265 Cucumis sativus
Cucsa.152170 10.0kb upstream 10.0kb upstream 1965 false scaffold01119: 543301-545265 Cucumis sativus
Cucsa.152170 10.0kb downstream 10.0kb downstream 16444 true scaffold01119: 526857-543300 Cucumis sativus
Cucsa.152170 10.0kb downstream 10.0kb downstream 10000 false scaffold01119: 526857-536856 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302206 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain