Gene : Cucsa.153280 C. sativus v1.0
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  71
Name:  ? Cucsa.153280 Secondary Identifier:  ? PAC:16964671
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.153280 0.5kb upstream 0.5kb upstream 8110 true scaffold01124: 457593-465702 Cucumis sativus
Cucsa.153280 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 465203-465702 Cucumis sativus
Cucsa.153280 0.5kb downstream 0.5kb downstream 8110 true scaffold01124: 457093-465202 Cucumis sativus
Cucsa.153280 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 457093-457592 Cucumis sativus
Cucsa.153280 1.0kb upstream 1.0kb upstream 8610 true scaffold01124: 457593-466202 Cucumis sativus
Cucsa.153280 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 465203-466202 Cucumis sativus
Cucsa.153280 1.0kb downstream 1.0kb downstream 8610 true scaffold01124: 456593-465202 Cucumis sativus
Cucsa.153280 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 456593-457592 Cucumis sativus
Cucsa.153280 2.0kb upstream 2.0kb upstream 9610 true scaffold01124: 457593-467202 Cucumis sativus
Cucsa.153280 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 465203-467202 Cucumis sativus
Cucsa.153280 2.0kb downstream 2.0kb downstream 9610 true scaffold01124: 455593-465202 Cucumis sativus
Cucsa.153280 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 455593-457592 Cucumis sativus
Cucsa.153280 5.0kb upstream 5.0kb upstream 12610 true scaffold01124: 457593-470202 Cucumis sativus
Cucsa.153280 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 465203-470202 Cucumis sativus
Cucsa.153280 5.0kb downstream 5.0kb downstream 12610 true scaffold01124: 452593-465202 Cucumis sativus
Cucsa.153280 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 452593-457592 Cucumis sativus
Cucsa.153280 10.0kb upstream 10.0kb upstream 17610 true scaffold01124: 457593-475202 Cucumis sativus
Cucsa.153280 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 465203-475202 Cucumis sativus
Cucsa.153280 10.0kb downstream 10.0kb downstream 17610 true scaffold01124: 447593-465202 Cucumis sativus
Cucsa.153280 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 447593-457592 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307640 5265 Fabidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain