Gene : Cucsa.175480 C. sativus v1.0
Defline:  (1 of 1) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  24
Name:  ? Cucsa.175480 Secondary Identifier:  ? PAC:16966762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.175480 0.5kb upstream 0.5kb upstream 2237 true scaffold01225: 156653-158889 Cucumis sativus
Cucsa.175480 0.5kb upstream 0.5kb upstream 500 false scaffold01225: 158390-158889 Cucumis sativus
Cucsa.175480 0.5kb downstream 0.5kb downstream 2237 true scaffold01225: 156153-158389 Cucumis sativus
Cucsa.175480 0.5kb downstream 0.5kb downstream 500 false scaffold01225: 156153-156652 Cucumis sativus
Cucsa.175480 1.0kb upstream 1.0kb upstream 2737 true scaffold01225: 156653-159389 Cucumis sativus
Cucsa.175480 1.0kb upstream 1.0kb upstream 1000 false scaffold01225: 158390-159389 Cucumis sativus
Cucsa.175480 1.0kb downstream 1.0kb downstream 2737 true scaffold01225: 155653-158389 Cucumis sativus
Cucsa.175480 1.0kb downstream 1.0kb downstream 1000 false scaffold01225: 155653-156652 Cucumis sativus
Cucsa.175480 2.0kb upstream 2.0kb upstream 3737 true scaffold01225: 156653-160389 Cucumis sativus
Cucsa.175480 2.0kb upstream 2.0kb upstream 2000 false scaffold01225: 158390-160389 Cucumis sativus
Cucsa.175480 2.0kb downstream 2.0kb downstream 3737 true scaffold01225: 154653-158389 Cucumis sativus
Cucsa.175480 2.0kb downstream 2.0kb downstream 2000 false scaffold01225: 154653-156652 Cucumis sativus
Cucsa.175480 5.0kb upstream 5.0kb upstream 6737 true scaffold01225: 156653-163389 Cucumis sativus
Cucsa.175480 5.0kb upstream 5.0kb upstream 5000 false scaffold01225: 158390-163389 Cucumis sativus
Cucsa.175480 5.0kb downstream 5.0kb downstream 6737 true scaffold01225: 151653-158389 Cucumis sativus
Cucsa.175480 5.0kb downstream 5.0kb downstream 5000 false scaffold01225: 151653-156652 Cucumis sativus
Cucsa.175480 10.0kb upstream 10.0kb upstream 11737 true scaffold01225: 156653-168389 Cucumis sativus
Cucsa.175480 10.0kb upstream 10.0kb upstream 10000 false scaffold01225: 158390-168389 Cucumis sativus
Cucsa.175480 10.0kb downstream 10.0kb downstream 11737 true scaffold01225: 146653-158389 Cucumis sativus
Cucsa.175480 10.0kb downstream 10.0kb downstream 10000 false scaffold01225: 146653-156652 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603715 5273 Angiosperm Singleton cluster - no MSA
122233964 5265 Fabidae Singleton cluster - no MSA
123980190 5270 Rosid Singleton cluster - no MSA
123555867 5271 Pentapetalae Singleton cluster - no MSA
122590681 5272 Eudicot Singleton cluster - no MSA
120876005 5274 Embryophyte Singleton cluster - no MSA
122916896 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain