Gene : Cucsa.176760 C. sativus v1.0
Defline:  (1 of 11) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  151
Name:  ? Cucsa.176760 Secondary Identifier:  ? PAC:16966929
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.176760 0.5kb upstream 0.5kb upstream 2567 true scaffold01225: 862792-865358 Cucumis sativus
Cucsa.176760 0.5kb upstream 0.5kb upstream 500 false scaffold01225: 862792-863291 Cucumis sativus
Cucsa.176760 0.5kb downstream 0.5kb downstream 2567 true scaffold01225: 863292-865858 Cucumis sativus
Cucsa.176760 0.5kb downstream 0.5kb downstream 500 false scaffold01225: 865359-865858 Cucumis sativus
Cucsa.176760 1.0kb upstream 1.0kb upstream 3067 true scaffold01225: 862292-865358 Cucumis sativus
Cucsa.176760 1.0kb upstream 1.0kb upstream 1000 false scaffold01225: 862292-863291 Cucumis sativus
Cucsa.176760 1.0kb downstream 1.0kb downstream 3067 true scaffold01225: 863292-866358 Cucumis sativus
Cucsa.176760 1.0kb downstream 1.0kb downstream 1000 false scaffold01225: 865359-866358 Cucumis sativus
Cucsa.176760 2.0kb upstream 2.0kb upstream 4067 true scaffold01225: 861292-865358 Cucumis sativus
Cucsa.176760 2.0kb upstream 2.0kb upstream 2000 false scaffold01225: 861292-863291 Cucumis sativus
Cucsa.176760 2.0kb downstream 2.0kb downstream 4067 true scaffold01225: 863292-867358 Cucumis sativus
Cucsa.176760 2.0kb downstream 2.0kb downstream 2000 false scaffold01225: 865359-867358 Cucumis sativus
Cucsa.176760 5.0kb upstream 5.0kb upstream 7067 true scaffold01225: 858292-865358 Cucumis sativus
Cucsa.176760 5.0kb upstream 5.0kb upstream 5000 false scaffold01225: 858292-863291 Cucumis sativus
Cucsa.176760 5.0kb downstream 5.0kb downstream 7067 true scaffold01225: 863292-870358 Cucumis sativus
Cucsa.176760 5.0kb downstream 5.0kb downstream 5000 false scaffold01225: 865359-870358 Cucumis sativus
Cucsa.176760 10.0kb upstream 10.0kb upstream 12067 true scaffold01225: 853292-865358 Cucumis sativus
Cucsa.176760 10.0kb upstream 10.0kb upstream 10000 false scaffold01225: 853292-863291 Cucumis sativus
Cucsa.176760 10.0kb downstream 10.0kb downstream 12067 true scaffold01225: 863292-875358 Cucumis sativus
Cucsa.176760 10.0kb downstream 10.0kb downstream 10000 false scaffold01225: 865359-875358 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299021 5265 Fabidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain