Gene : Cucsa.174150 C. sativus v1.0
Defline:  (1 of 41) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  9
Name:  ? Cucsa.174150 Secondary Identifier:  ? PAC:16966661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.174150 0.5kb upstream 0.5kb upstream 1622 true scaffold01219: 124980-126601 Cucumis sativus
Cucsa.174150 0.5kb upstream 0.5kb upstream 500 false scaffold01219: 126102-126601 Cucumis sativus
Cucsa.174150 0.5kb downstream 0.5kb downstream 1622 true scaffold01219: 124480-126101 Cucumis sativus
Cucsa.174150 0.5kb downstream 0.5kb downstream 500 false scaffold01219: 124480-124979 Cucumis sativus
Cucsa.174150 1.0kb upstream 1.0kb upstream 2122 true scaffold01219: 124980-127101 Cucumis sativus
Cucsa.174150 1.0kb upstream 1.0kb upstream 1000 false scaffold01219: 126102-127101 Cucumis sativus
Cucsa.174150 1.0kb downstream 1.0kb downstream 2122 true scaffold01219: 123980-126101 Cucumis sativus
Cucsa.174150 1.0kb downstream 1.0kb downstream 1000 false scaffold01219: 123980-124979 Cucumis sativus
Cucsa.174150 2.0kb upstream 2.0kb upstream 3122 true scaffold01219: 124980-128101 Cucumis sativus
Cucsa.174150 2.0kb upstream 2.0kb upstream 2000 false scaffold01219: 126102-128101 Cucumis sativus
Cucsa.174150 2.0kb downstream 2.0kb downstream 3122 true scaffold01219: 122980-126101 Cucumis sativus
Cucsa.174150 2.0kb downstream 2.0kb downstream 2000 false scaffold01219: 122980-124979 Cucumis sativus
Cucsa.174150 5.0kb upstream 5.0kb upstream 6122 true scaffold01219: 124980-131101 Cucumis sativus
Cucsa.174150 5.0kb upstream 5.0kb upstream 5000 false scaffold01219: 126102-131101 Cucumis sativus
Cucsa.174150 5.0kb downstream 5.0kb downstream 6122 true scaffold01219: 119980-126101 Cucumis sativus
Cucsa.174150 5.0kb downstream 5.0kb downstream 5000 false scaffold01219: 119980-124979 Cucumis sativus
Cucsa.174150 10.0kb upstream 10.0kb upstream 11122 true scaffold01219: 124980-136101 Cucumis sativus
Cucsa.174150 10.0kb upstream 10.0kb upstream 10000 false scaffold01219: 126102-136101 Cucumis sativus
Cucsa.174150 10.0kb downstream 10.0kb downstream 11122 true scaffold01219: 114980-126101 Cucumis sativus
Cucsa.174150 10.0kb downstream 10.0kb downstream 10000 false scaffold01219: 114980-124979 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314980 5265 Fabidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain