Gene : Cucsa.173440 C. sativus v1.0
Defline:  (1 of 4) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  3
Name:  ? Cucsa.173440 Secondary Identifier:  ? PAC:16966617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.173440 0.5kb upstream 0.5kb upstream 1039 true scaffold01209: 47464-48502 Cucumis sativus
Cucsa.173440 0.5kb upstream 0.5kb upstream 500 false scaffold01209: 48003-48502 Cucumis sativus
Cucsa.173440 0.5kb downstream 0.5kb downstream 1039 true scaffold01209: 46964-48002 Cucumis sativus
Cucsa.173440 0.5kb downstream 0.5kb downstream 500 false scaffold01209: 46964-47463 Cucumis sativus
Cucsa.173440 1.0kb upstream 1.0kb upstream 1539 true scaffold01209: 47464-49002 Cucumis sativus
Cucsa.173440 1.0kb upstream 1.0kb upstream 1000 false scaffold01209: 48003-49002 Cucumis sativus
Cucsa.173440 1.0kb downstream 1.0kb downstream 1539 true scaffold01209: 46464-48002 Cucumis sativus
Cucsa.173440 1.0kb downstream 1.0kb downstream 1000 false scaffold01209: 46464-47463 Cucumis sativus
Cucsa.173440 2.0kb upstream 2.0kb upstream 2539 true scaffold01209: 47464-50002 Cucumis sativus
Cucsa.173440 2.0kb upstream 2.0kb upstream 2000 false scaffold01209: 48003-50002 Cucumis sativus
Cucsa.173440 2.0kb downstream 2.0kb downstream 2539 true scaffold01209: 45464-48002 Cucumis sativus
Cucsa.173440 2.0kb downstream 2.0kb downstream 2000 false scaffold01209: 45464-47463 Cucumis sativus
Cucsa.173440 5.0kb upstream 5.0kb upstream 5539 true scaffold01209: 47464-53002 Cucumis sativus
Cucsa.173440 5.0kb upstream 5.0kb upstream 5000 false scaffold01209: 48003-53002 Cucumis sativus
Cucsa.173440 5.0kb downstream 5.0kb downstream 5539 true scaffold01209: 42464-48002 Cucumis sativus
Cucsa.173440 5.0kb downstream 5.0kb downstream 5000 false scaffold01209: 42464-47463 Cucumis sativus
Cucsa.173440 10.0kb upstream 10.0kb upstream 10539 true scaffold01209: 47464-58002 Cucumis sativus
Cucsa.173440 10.0kb upstream 10.0kb upstream 10000 false scaffold01209: 48003-58002 Cucumis sativus
Cucsa.173440 10.0kb downstream 10.0kb downstream 10539 true scaffold01209: 37464-48002 Cucumis sativus
Cucsa.173440 10.0kb downstream 10.0kb downstream 10000 false scaffold01209: 37464-47463 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312972 5265 Fabidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain