Gene : Cucsa.173420 C. sativus v1.0
Defline:  (1 of 2) PTHR22904//PTHR22904:SF167 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2
Name:  ? Cucsa.173420 Secondary Identifier:  ? PAC:16966614
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.173420 0.5kb upstream 0.5kb upstream 4198 true scaffold01209: 24993-29190 Cucumis sativus
Cucsa.173420 0.5kb upstream 0.5kb upstream 500 false scaffold01209: 24993-25492 Cucumis sativus
Cucsa.173420 0.5kb downstream 0.5kb downstream 4198 true scaffold01209: 25493-29690 Cucumis sativus
Cucsa.173420 0.5kb downstream 0.5kb downstream 500 false scaffold01209: 29191-29690 Cucumis sativus
Cucsa.173420 1.0kb upstream 1.0kb upstream 4698 true scaffold01209: 24493-29190 Cucumis sativus
Cucsa.173420 1.0kb upstream 1.0kb upstream 1000 false scaffold01209: 24493-25492 Cucumis sativus
Cucsa.173420 1.0kb downstream 1.0kb downstream 4698 true scaffold01209: 25493-30190 Cucumis sativus
Cucsa.173420 1.0kb downstream 1.0kb downstream 1000 false scaffold01209: 29191-30190 Cucumis sativus
Cucsa.173420 2.0kb upstream 2.0kb upstream 5698 true scaffold01209: 23493-29190 Cucumis sativus
Cucsa.173420 2.0kb upstream 2.0kb upstream 2000 false scaffold01209: 23493-25492 Cucumis sativus
Cucsa.173420 2.0kb downstream 2.0kb downstream 5698 true scaffold01209: 25493-31190 Cucumis sativus
Cucsa.173420 2.0kb downstream 2.0kb downstream 2000 false scaffold01209: 29191-31190 Cucumis sativus
Cucsa.173420 5.0kb upstream 5.0kb upstream 8698 true scaffold01209: 20493-29190 Cucumis sativus
Cucsa.173420 5.0kb upstream 5.0kb upstream 5000 false scaffold01209: 20493-25492 Cucumis sativus
Cucsa.173420 5.0kb downstream 5.0kb downstream 8698 true scaffold01209: 25493-34190 Cucumis sativus
Cucsa.173420 5.0kb downstream 5.0kb downstream 5000 false scaffold01209: 29191-34190 Cucumis sativus
Cucsa.173420 10.0kb upstream 10.0kb upstream 13698 true scaffold01209: 15493-29190 Cucumis sativus
Cucsa.173420 10.0kb upstream 10.0kb upstream 10000 false scaffold01209: 15493-25492 Cucumis sativus
Cucsa.173420 10.0kb downstream 10.0kb downstream 13698 true scaffold01209: 25493-39190 Cucumis sativus
Cucsa.173420 10.0kb downstream 10.0kb downstream 10000 false scaffold01209: 29191-39190 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603684 5273 Angiosperm Singleton cluster - no MSA
122233933 5265 Fabidae Singleton cluster - no MSA
123980159 5270 Rosid Singleton cluster - no MSA
123555836 5271 Pentapetalae Singleton cluster - no MSA
122590650 5272 Eudicot Singleton cluster - no MSA
120875974 5274 Embryophyte Singleton cluster - no MSA
122916865 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain