Gene : Cucsa.170790 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  16
Name:  ? Cucsa.170790 Secondary Identifier:  ? PAC:16966511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.170790 0.5kb upstream 0.5kb upstream 4055 true scaffold01179: 116982-121036 Cucumis sativus
Cucsa.170790 0.5kb upstream 0.5kb upstream 500 false scaffold01179: 116982-117481 Cucumis sativus
Cucsa.170790 0.5kb downstream 0.5kb downstream 4055 true scaffold01179: 117482-121536 Cucumis sativus
Cucsa.170790 0.5kb downstream 0.5kb downstream 500 false scaffold01179: 121037-121536 Cucumis sativus
Cucsa.170790 1.0kb upstream 1.0kb upstream 4555 true scaffold01179: 116482-121036 Cucumis sativus
Cucsa.170790 1.0kb upstream 1.0kb upstream 1000 false scaffold01179: 116482-117481 Cucumis sativus
Cucsa.170790 1.0kb downstream 1.0kb downstream 4555 true scaffold01179: 117482-122036 Cucumis sativus
Cucsa.170790 1.0kb downstream 1.0kb downstream 1000 false scaffold01179: 121037-122036 Cucumis sativus
Cucsa.170790 2.0kb upstream 2.0kb upstream 5555 true scaffold01179: 115482-121036 Cucumis sativus
Cucsa.170790 2.0kb upstream 2.0kb upstream 2000 false scaffold01179: 115482-117481 Cucumis sativus
Cucsa.170790 2.0kb downstream 2.0kb downstream 5555 true scaffold01179: 117482-123036 Cucumis sativus
Cucsa.170790 2.0kb downstream 2.0kb downstream 2000 false scaffold01179: 121037-123036 Cucumis sativus
Cucsa.170790 5.0kb upstream 5.0kb upstream 8555 true scaffold01179: 112482-121036 Cucumis sativus
Cucsa.170790 5.0kb upstream 5.0kb upstream 5000 false scaffold01179: 112482-117481 Cucumis sativus
Cucsa.170790 5.0kb downstream 5.0kb downstream 8555 true scaffold01179: 117482-126036 Cucumis sativus
Cucsa.170790 5.0kb downstream 5.0kb downstream 5000 false scaffold01179: 121037-126036 Cucumis sativus
Cucsa.170790 10.0kb upstream 10.0kb upstream 13555 true scaffold01179: 107482-121036 Cucumis sativus
Cucsa.170790 10.0kb upstream 10.0kb upstream 10000 false scaffold01179: 107482-117481 Cucumis sativus
Cucsa.170790 10.0kb downstream 10.0kb downstream 13555 true scaffold01179: 117482-131036 Cucumis sativus
Cucsa.170790 10.0kb downstream 10.0kb downstream 10000 false scaffold01179: 121037-131036 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311262 5265 Fabidae View MSA
124061402 5270 Rosid View MSA
123744110 5271 Pentapetalae View MSA
122797615 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain