Gene : Cucsa.163580 C. sativus v1.0
Defline:  (1 of 1) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Genomic Order:  5
Name:  ? Cucsa.163580 Secondary Identifier:  ? PAC:16965821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.163580 0.5kb upstream 0.5kb upstream 6606 true scaffold01146: 43583-50188 Cucumis sativus
Cucsa.163580 0.5kb upstream 0.5kb upstream 500 false scaffold01146: 43583-44082 Cucumis sativus
Cucsa.163580 0.5kb downstream 0.5kb downstream 6606 true scaffold01146: 44083-50688 Cucumis sativus
Cucsa.163580 0.5kb downstream 0.5kb downstream 500 false scaffold01146: 50189-50688 Cucumis sativus
Cucsa.163580 1.0kb upstream 1.0kb upstream 7106 true scaffold01146: 43083-50188 Cucumis sativus
Cucsa.163580 1.0kb upstream 1.0kb upstream 1000 false scaffold01146: 43083-44082 Cucumis sativus
Cucsa.163580 1.0kb downstream 1.0kb downstream 7106 true scaffold01146: 44083-51188 Cucumis sativus
Cucsa.163580 1.0kb downstream 1.0kb downstream 1000 false scaffold01146: 50189-51188 Cucumis sativus
Cucsa.163580 2.0kb upstream 2.0kb upstream 8106 true scaffold01146: 42083-50188 Cucumis sativus
Cucsa.163580 2.0kb upstream 2.0kb upstream 2000 false scaffold01146: 42083-44082 Cucumis sativus
Cucsa.163580 2.0kb downstream 2.0kb downstream 8106 true scaffold01146: 44083-52188 Cucumis sativus
Cucsa.163580 2.0kb downstream 2.0kb downstream 2000 false scaffold01146: 50189-52188 Cucumis sativus
Cucsa.163580 5.0kb upstream 5.0kb upstream 11106 true scaffold01146: 39083-50188 Cucumis sativus
Cucsa.163580 5.0kb upstream 5.0kb upstream 5000 false scaffold01146: 39083-44082 Cucumis sativus
Cucsa.163580 5.0kb downstream 5.0kb downstream 11106 true scaffold01146: 44083-55188 Cucumis sativus
Cucsa.163580 5.0kb downstream 5.0kb downstream 5000 false scaffold01146: 50189-55188 Cucumis sativus
Cucsa.163580 10.0kb upstream 10.0kb upstream 16106 true scaffold01146: 34083-50188 Cucumis sativus
Cucsa.163580 10.0kb upstream 10.0kb upstream 10000 false scaffold01146: 34083-44082 Cucumis sativus
Cucsa.163580 10.0kb downstream 10.0kb downstream 16106 true scaffold01146: 44083-60188 Cucumis sativus
Cucsa.163580 10.0kb downstream 10.0kb downstream 10000 false scaffold01146: 50189-60188 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314731 5265 Fabidae View MSA
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain