Gene : Cucsa.163560 C. sativus v1.0
Defline:  (1 of 39) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3
Name:  ? Cucsa.163560 Secondary Identifier:  ? PAC:16965818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.163560 0.5kb upstream 0.5kb upstream 2905 true scaffold01146: 31459-34363 Cucumis sativus
Cucsa.163560 0.5kb upstream 0.5kb upstream 500 false scaffold01146: 31459-31958 Cucumis sativus
Cucsa.163560 0.5kb downstream 0.5kb downstream 2905 true scaffold01146: 31959-34863 Cucumis sativus
Cucsa.163560 0.5kb downstream 0.5kb downstream 500 false scaffold01146: 34364-34863 Cucumis sativus
Cucsa.163560 1.0kb upstream 1.0kb upstream 3405 true scaffold01146: 30959-34363 Cucumis sativus
Cucsa.163560 1.0kb upstream 1.0kb upstream 1000 false scaffold01146: 30959-31958 Cucumis sativus
Cucsa.163560 1.0kb downstream 1.0kb downstream 3405 true scaffold01146: 31959-35363 Cucumis sativus
Cucsa.163560 1.0kb downstream 1.0kb downstream 1000 false scaffold01146: 34364-35363 Cucumis sativus
Cucsa.163560 2.0kb upstream 2.0kb upstream 4405 true scaffold01146: 29959-34363 Cucumis sativus
Cucsa.163560 2.0kb upstream 2.0kb upstream 2000 false scaffold01146: 29959-31958 Cucumis sativus
Cucsa.163560 2.0kb downstream 2.0kb downstream 4405 true scaffold01146: 31959-36363 Cucumis sativus
Cucsa.163560 2.0kb downstream 2.0kb downstream 2000 false scaffold01146: 34364-36363 Cucumis sativus
Cucsa.163560 5.0kb upstream 5.0kb upstream 7405 true scaffold01146: 26959-34363 Cucumis sativus
Cucsa.163560 5.0kb upstream 5.0kb upstream 5000 false scaffold01146: 26959-31958 Cucumis sativus
Cucsa.163560 5.0kb downstream 5.0kb downstream 7405 true scaffold01146: 31959-39363 Cucumis sativus
Cucsa.163560 5.0kb downstream 5.0kb downstream 5000 false scaffold01146: 34364-39363 Cucumis sativus
Cucsa.163560 10.0kb upstream 10.0kb upstream 12405 true scaffold01146: 21959-34363 Cucumis sativus
Cucsa.163560 10.0kb upstream 10.0kb upstream 10000 false scaffold01146: 21959-31958 Cucumis sativus
Cucsa.163560 10.0kb downstream 10.0kb downstream 12405 true scaffold01146: 31959-44363 Cucumis sativus
Cucsa.163560 10.0kb downstream 10.0kb downstream 10000 false scaffold01146: 34364-44363 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305632 5265 Fabidae View MSA
124050338 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain