Gene : Cucsa.158770 C. sativus v1.0
Defline:  (1 of 1) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 Genomic Order:  105
Name:  ? Cucsa.158770 Secondary Identifier:  ? PAC:16965170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158770 0.5kb upstream 0.5kb upstream 1306 true scaffold01142: 856399-857704 Cucumis sativus
Cucsa.158770 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 857205-857704 Cucumis sativus
Cucsa.158770 0.5kb downstream 0.5kb downstream 1306 true scaffold01142: 855899-857204 Cucumis sativus
Cucsa.158770 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 855899-856398 Cucumis sativus
Cucsa.158770 1.0kb upstream 1.0kb upstream 1806 true scaffold01142: 856399-858204 Cucumis sativus
Cucsa.158770 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 857205-858204 Cucumis sativus
Cucsa.158770 1.0kb downstream 1.0kb downstream 1806 true scaffold01142: 855399-857204 Cucumis sativus
Cucsa.158770 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 855399-856398 Cucumis sativus
Cucsa.158770 2.0kb upstream 2.0kb upstream 2806 true scaffold01142: 856399-859204 Cucumis sativus
Cucsa.158770 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 857205-859204 Cucumis sativus
Cucsa.158770 2.0kb downstream 2.0kb downstream 2806 true scaffold01142: 854399-857204 Cucumis sativus
Cucsa.158770 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 854399-856398 Cucumis sativus
Cucsa.158770 5.0kb upstream 5.0kb upstream 5806 true scaffold01142: 856399-862204 Cucumis sativus
Cucsa.158770 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 857205-862204 Cucumis sativus
Cucsa.158770 5.0kb downstream 5.0kb downstream 5806 true scaffold01142: 851399-857204 Cucumis sativus
Cucsa.158770 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 851399-856398 Cucumis sativus
Cucsa.158770 10.0kb upstream 10.0kb upstream 10806 true scaffold01142: 856399-867204 Cucumis sativus
Cucsa.158770 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 857205-867204 Cucumis sativus
Cucsa.158770 10.0kb downstream 10.0kb downstream 10806 true scaffold01142: 846399-857204 Cucumis sativus
Cucsa.158770 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 846399-856398 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122237527 5265 Fabidae View MSA
124075488 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain