Gene : Cucsa.158780 C. sativus v1.0
Defline:  (1 of 5) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  106
Name:  ? Cucsa.158780 Secondary Identifier:  ? PAC:16965171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158780 0.5kb upstream 0.5kb upstream 1381 true scaffold01142: 860699-862079 Cucumis sativus
Cucsa.158780 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 861580-862079 Cucumis sativus
Cucsa.158780 0.5kb downstream 0.5kb downstream 1381 true scaffold01142: 860199-861579 Cucumis sativus
Cucsa.158780 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 860199-860698 Cucumis sativus
Cucsa.158780 1.0kb upstream 1.0kb upstream 1881 true scaffold01142: 860699-862579 Cucumis sativus
Cucsa.158780 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 861580-862579 Cucumis sativus
Cucsa.158780 1.0kb downstream 1.0kb downstream 1881 true scaffold01142: 859699-861579 Cucumis sativus
Cucsa.158780 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 859699-860698 Cucumis sativus
Cucsa.158780 2.0kb upstream 2.0kb upstream 2881 true scaffold01142: 860699-863579 Cucumis sativus
Cucsa.158780 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 861580-863579 Cucumis sativus
Cucsa.158780 2.0kb downstream 2.0kb downstream 2881 true scaffold01142: 858699-861579 Cucumis sativus
Cucsa.158780 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 858699-860698 Cucumis sativus
Cucsa.158780 5.0kb upstream 5.0kb upstream 5881 true scaffold01142: 860699-866579 Cucumis sativus
Cucsa.158780 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 861580-866579 Cucumis sativus
Cucsa.158780 5.0kb downstream 5.0kb downstream 5881 true scaffold01142: 855699-861579 Cucumis sativus
Cucsa.158780 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 855699-860698 Cucumis sativus
Cucsa.158780 10.0kb upstream 10.0kb upstream 10881 true scaffold01142: 860699-871579 Cucumis sativus
Cucsa.158780 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 861580-871579 Cucumis sativus
Cucsa.158780 10.0kb downstream 10.0kb downstream 10881 true scaffold01142: 850699-861579 Cucumis sativus
Cucsa.158780 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 850699-860698 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122237527 5265 Fabidae View MSA
124075488 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain