Gene : Cucsa.158810 C. sativus v1.0
Defline:  (1 of 5) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  109
Name:  ? Cucsa.158810 Secondary Identifier:  ? PAC:16965174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.158810 0.5kb upstream 0.5kb upstream 1412 true scaffold01142: 873647-875058 Cucumis sativus
Cucsa.158810 0.5kb upstream 0.5kb upstream 500 false scaffold01142: 874559-875058 Cucumis sativus
Cucsa.158810 0.5kb downstream 0.5kb downstream 1412 true scaffold01142: 873147-874558 Cucumis sativus
Cucsa.158810 0.5kb downstream 0.5kb downstream 500 false scaffold01142: 873147-873646 Cucumis sativus
Cucsa.158810 1.0kb upstream 1.0kb upstream 1912 true scaffold01142: 873647-875558 Cucumis sativus
Cucsa.158810 1.0kb upstream 1.0kb upstream 1000 false scaffold01142: 874559-875558 Cucumis sativus
Cucsa.158810 1.0kb downstream 1.0kb downstream 1912 true scaffold01142: 872647-874558 Cucumis sativus
Cucsa.158810 1.0kb downstream 1.0kb downstream 1000 false scaffold01142: 872647-873646 Cucumis sativus
Cucsa.158810 2.0kb upstream 2.0kb upstream 2912 true scaffold01142: 873647-876558 Cucumis sativus
Cucsa.158810 2.0kb upstream 2.0kb upstream 2000 false scaffold01142: 874559-876558 Cucumis sativus
Cucsa.158810 2.0kb downstream 2.0kb downstream 2912 true scaffold01142: 871647-874558 Cucumis sativus
Cucsa.158810 2.0kb downstream 2.0kb downstream 2000 false scaffold01142: 871647-873646 Cucumis sativus
Cucsa.158810 5.0kb upstream 5.0kb upstream 5912 true scaffold01142: 873647-879558 Cucumis sativus
Cucsa.158810 5.0kb upstream 5.0kb upstream 5000 false scaffold01142: 874559-879558 Cucumis sativus
Cucsa.158810 5.0kb downstream 5.0kb downstream 5912 true scaffold01142: 868647-874558 Cucumis sativus
Cucsa.158810 5.0kb downstream 5.0kb downstream 5000 false scaffold01142: 868647-873646 Cucumis sativus
Cucsa.158810 10.0kb upstream 10.0kb upstream 10912 true scaffold01142: 873647-884558 Cucumis sativus
Cucsa.158810 10.0kb upstream 10.0kb upstream 10000 false scaffold01142: 874559-884558 Cucumis sativus
Cucsa.158810 10.0kb downstream 10.0kb downstream 10912 true scaffold01142: 863647-874558 Cucumis sativus
Cucsa.158810 10.0kb downstream 10.0kb downstream 10000 false scaffold01142: 863647-873646 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122237525 5265 Fabidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain