Gene : Cucsa.147580 C. sativus v1.0
Defline:  (1 of 2) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  5
Name:  ? Cucsa.147580 Secondary Identifier:  ? PAC:16964035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.147580 0.5kb upstream 0.5kb upstream 1268 true scaffold01107: 38599-39866 Cucumis sativus
Cucsa.147580 0.5kb upstream 0.5kb upstream 500 false scaffold01107: 39367-39866 Cucumis sativus
Cucsa.147580 0.5kb downstream 0.5kb downstream 1268 true scaffold01107: 38099-39366 Cucumis sativus
Cucsa.147580 0.5kb downstream 0.5kb downstream 500 false scaffold01107: 38099-38598 Cucumis sativus
Cucsa.147580 1.0kb upstream 1.0kb upstream 1768 true scaffold01107: 38599-40366 Cucumis sativus
Cucsa.147580 1.0kb upstream 1.0kb upstream 1000 false scaffold01107: 39367-40366 Cucumis sativus
Cucsa.147580 1.0kb downstream 1.0kb downstream 1768 true scaffold01107: 37599-39366 Cucumis sativus
Cucsa.147580 1.0kb downstream 1.0kb downstream 1000 false scaffold01107: 37599-38598 Cucumis sativus
Cucsa.147580 2.0kb upstream 2.0kb upstream 2768 true scaffold01107: 38599-41366 Cucumis sativus
Cucsa.147580 2.0kb upstream 2.0kb upstream 2000 false scaffold01107: 39367-41366 Cucumis sativus
Cucsa.147580 2.0kb downstream 2.0kb downstream 2768 true scaffold01107: 36599-39366 Cucumis sativus
Cucsa.147580 2.0kb downstream 2.0kb downstream 2000 false scaffold01107: 36599-38598 Cucumis sativus
Cucsa.147580 5.0kb upstream 5.0kb upstream 5768 true scaffold01107: 38599-44366 Cucumis sativus
Cucsa.147580 5.0kb upstream 5.0kb upstream 5000 false scaffold01107: 39367-44366 Cucumis sativus
Cucsa.147580 5.0kb downstream 5.0kb downstream 5768 true scaffold01107: 33599-39366 Cucumis sativus
Cucsa.147580 5.0kb downstream 5.0kb downstream 5000 false scaffold01107: 33599-38598 Cucumis sativus
Cucsa.147580 10.0kb upstream 10.0kb upstream 10768 true scaffold01107: 38599-49366 Cucumis sativus
Cucsa.147580 10.0kb upstream 10.0kb upstream 10000 false scaffold01107: 39367-49366 Cucumis sativus
Cucsa.147580 10.0kb downstream 10.0kb downstream 10768 true scaffold01107: 28599-39366 Cucumis sativus
Cucsa.147580 10.0kb downstream 10.0kb downstream 10000 false scaffold01107: 28599-38598 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122308200 5265 Fabidae View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain