Gene : Cucsa.146870 C. sativus v1.0
Defline:  (1 of 2) PTHR11709:SF103 - LACCASE-16 Genomic Order:  36
Name:  ? Cucsa.146870 Secondary Identifier:  ? PAC:16963983
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5466 Cucumis sativus pathologic  
Csativus PWY-6824 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.146870 0.5kb upstream 0.5kb upstream 6660 true scaffold01100: 225095-231754 Cucumis sativus
Cucsa.146870 0.5kb upstream 0.5kb upstream 500 false scaffold01100: 225095-225594 Cucumis sativus
Cucsa.146870 0.5kb downstream 0.5kb downstream 6660 true scaffold01100: 225595-232254 Cucumis sativus
Cucsa.146870 0.5kb downstream 0.5kb downstream 500 false scaffold01100: 231755-232254 Cucumis sativus
Cucsa.146870 1.0kb upstream 1.0kb upstream 7160 true scaffold01100: 224595-231754 Cucumis sativus
Cucsa.146870 1.0kb upstream 1.0kb upstream 1000 false scaffold01100: 224595-225594 Cucumis sativus
Cucsa.146870 1.0kb downstream 1.0kb downstream 7160 true scaffold01100: 225595-232754 Cucumis sativus
Cucsa.146870 1.0kb downstream 1.0kb downstream 1000 false scaffold01100: 231755-232754 Cucumis sativus
Cucsa.146870 2.0kb upstream 2.0kb upstream 8160 true scaffold01100: 223595-231754 Cucumis sativus
Cucsa.146870 2.0kb upstream 2.0kb upstream 2000 false scaffold01100: 223595-225594 Cucumis sativus
Cucsa.146870 2.0kb downstream 2.0kb downstream 8160 true scaffold01100: 225595-233754 Cucumis sativus
Cucsa.146870 2.0kb downstream 2.0kb downstream 2000 false scaffold01100: 231755-233754 Cucumis sativus
Cucsa.146870 5.0kb upstream 5.0kb upstream 11160 true scaffold01100: 220595-231754 Cucumis sativus
Cucsa.146870 5.0kb upstream 5.0kb upstream 5000 false scaffold01100: 220595-225594 Cucumis sativus
Cucsa.146870 5.0kb downstream 5.0kb downstream 11160 true scaffold01100: 225595-236754 Cucumis sativus
Cucsa.146870 5.0kb downstream 5.0kb downstream 5000 false scaffold01100: 231755-236754 Cucumis sativus
Cucsa.146870 10.0kb upstream 10.0kb upstream 16160 true scaffold01100: 215595-231754 Cucumis sativus
Cucsa.146870 10.0kb upstream 10.0kb upstream 10000 false scaffold01100: 215595-225594 Cucumis sativus
Cucsa.146870 10.0kb downstream 10.0kb downstream 16160 true scaffold01100: 225595-241754 Cucumis sativus
Cucsa.146870 10.0kb downstream 10.0kb downstream 10000 false scaffold01100: 231755-241754 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314801 5265 Fabidae View MSA
124069794 5270 Rosid View MSA
123752484 5271 Pentapetalae View MSA
122797198 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain