Gene : Cucsa.146580 C. sativus v1.0
Defline:  (1 of 1) KOG3473 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C Genomic Order:  7
Name:  ? Cucsa.146580 Secondary Identifier:  ? PAC:16963941
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.146580 0.5kb upstream 0.5kb upstream 2539 true scaffold01100: 30768-33306 Cucumis sativus
Cucsa.146580 0.5kb upstream 0.5kb upstream 500 false scaffold01100: 30768-31267 Cucumis sativus
Cucsa.146580 0.5kb downstream 0.5kb downstream 2539 true scaffold01100: 31268-33806 Cucumis sativus
Cucsa.146580 0.5kb downstream 0.5kb downstream 500 false scaffold01100: 33307-33806 Cucumis sativus
Cucsa.146580 1.0kb upstream 1.0kb upstream 3039 true scaffold01100: 30268-33306 Cucumis sativus
Cucsa.146580 1.0kb upstream 1.0kb upstream 1000 false scaffold01100: 30268-31267 Cucumis sativus
Cucsa.146580 1.0kb downstream 1.0kb downstream 3039 true scaffold01100: 31268-34306 Cucumis sativus
Cucsa.146580 1.0kb downstream 1.0kb downstream 1000 false scaffold01100: 33307-34306 Cucumis sativus
Cucsa.146580 2.0kb upstream 2.0kb upstream 4039 true scaffold01100: 29268-33306 Cucumis sativus
Cucsa.146580 2.0kb upstream 2.0kb upstream 2000 false scaffold01100: 29268-31267 Cucumis sativus
Cucsa.146580 2.0kb downstream 2.0kb downstream 4039 true scaffold01100: 31268-35306 Cucumis sativus
Cucsa.146580 2.0kb downstream 2.0kb downstream 2000 false scaffold01100: 33307-35306 Cucumis sativus
Cucsa.146580 5.0kb upstream 5.0kb upstream 7039 true scaffold01100: 26268-33306 Cucumis sativus
Cucsa.146580 5.0kb upstream 5.0kb upstream 5000 false scaffold01100: 26268-31267 Cucumis sativus
Cucsa.146580 5.0kb downstream 5.0kb downstream 7039 true scaffold01100: 31268-38306 Cucumis sativus
Cucsa.146580 5.0kb downstream 5.0kb downstream 5000 false scaffold01100: 33307-38306 Cucumis sativus
Cucsa.146580 10.0kb upstream 10.0kb upstream 12039 true scaffold01100: 21268-33306 Cucumis sativus
Cucsa.146580 10.0kb upstream 10.0kb upstream 10000 false scaffold01100: 21268-31267 Cucumis sativus
Cucsa.146580 10.0kb downstream 10.0kb downstream 12039 true scaffold01100: 31268-43306 Cucumis sativus
Cucsa.146580 10.0kb downstream 10.0kb downstream 10000 false scaffold01100: 33307-43306 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041156 5273 Angiosperm View MSA
122304929 5265 Fabidae View MSA
124062400 5270 Rosid View MSA
123740758 5271 Pentapetalae View MSA
122790523 5272 Eudicot View MSA
121349324 5274 Embryophyte View MSA
123423889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain