Gene : Cucsa.144010 C. sativus v1.0
Defline:  (1 of 1) PTHR11452//PTHR11452:SF33 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE Genomic Order:  33
Name:  ? Cucsa.144010 Secondary Identifier:  ? PAC:16963857
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY0-1301 Cucumis sativus pathologic  
Csativus PWY-6527 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.144010 0.5kb upstream 0.5kb upstream 9688 true scaffold01080: 390567-400254 Cucumis sativus
Cucsa.144010 0.5kb upstream 0.5kb upstream 500 false scaffold01080: 399755-400254 Cucumis sativus
Cucsa.144010 0.5kb downstream 0.5kb downstream 9688 true scaffold01080: 390067-399754 Cucumis sativus
Cucsa.144010 0.5kb downstream 0.5kb downstream 500 false scaffold01080: 390067-390566 Cucumis sativus
Cucsa.144010 1.0kb upstream 1.0kb upstream 10188 true scaffold01080: 390567-400754 Cucumis sativus
Cucsa.144010 1.0kb upstream 1.0kb upstream 1000 false scaffold01080: 399755-400754 Cucumis sativus
Cucsa.144010 1.0kb downstream 1.0kb downstream 10188 true scaffold01080: 389567-399754 Cucumis sativus
Cucsa.144010 1.0kb downstream 1.0kb downstream 1000 false scaffold01080: 389567-390566 Cucumis sativus
Cucsa.144010 2.0kb upstream 2.0kb upstream 11188 true scaffold01080: 390567-401754 Cucumis sativus
Cucsa.144010 2.0kb upstream 2.0kb upstream 2000 false scaffold01080: 399755-401754 Cucumis sativus
Cucsa.144010 2.0kb downstream 2.0kb downstream 11188 true scaffold01080: 388567-399754 Cucumis sativus
Cucsa.144010 2.0kb downstream 2.0kb downstream 2000 false scaffold01080: 388567-390566 Cucumis sativus
Cucsa.144010 5.0kb upstream 5.0kb upstream 14188 true scaffold01080: 390567-404754 Cucumis sativus
Cucsa.144010 5.0kb upstream 5.0kb upstream 5000 false scaffold01080: 399755-404754 Cucumis sativus
Cucsa.144010 5.0kb downstream 5.0kb downstream 14188 true scaffold01080: 385567-399754 Cucumis sativus
Cucsa.144010 5.0kb downstream 5.0kb downstream 5000 false scaffold01080: 385567-390566 Cucumis sativus
Cucsa.144010 10.0kb upstream 10.0kb upstream 19188 true scaffold01080: 390567-409754 Cucumis sativus
Cucsa.144010 10.0kb upstream 10.0kb upstream 10000 false scaffold01080: 399755-409754 Cucumis sativus
Cucsa.144010 10.0kb downstream 10.0kb downstream 19188 true scaffold01080: 380567-399754 Cucumis sativus
Cucsa.144010 10.0kb downstream 10.0kb downstream 10000 false scaffold01080: 380567-390566 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304427 5265 Fabidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain