Gene : Cucsa.143720 C. sativus v1.0
Defline:  (1 of 1) PTHR31008//PTHR31008:SF5 - COP1-INTERACTING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cucsa.143720 Secondary Identifier:  ? PAC:16963808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.143720 0.5kb upstream 0.5kb upstream 6476 true scaffold01080: 42996-49471 Cucumis sativus
Cucsa.143720 0.5kb upstream 0.5kb upstream 500 false scaffold01080: 48972-49471 Cucumis sativus
Cucsa.143720 0.5kb downstream 0.5kb downstream 6476 true scaffold01080: 42496-48971 Cucumis sativus
Cucsa.143720 0.5kb downstream 0.5kb downstream 500 false scaffold01080: 42496-42995 Cucumis sativus
Cucsa.143720 1.0kb upstream 1.0kb upstream 6976 true scaffold01080: 42996-49971 Cucumis sativus
Cucsa.143720 1.0kb upstream 1.0kb upstream 1000 false scaffold01080: 48972-49971 Cucumis sativus
Cucsa.143720 1.0kb downstream 1.0kb downstream 6976 true scaffold01080: 41996-48971 Cucumis sativus
Cucsa.143720 1.0kb downstream 1.0kb downstream 1000 false scaffold01080: 41996-42995 Cucumis sativus
Cucsa.143720 2.0kb upstream 2.0kb upstream 7976 true scaffold01080: 42996-50971 Cucumis sativus
Cucsa.143720 2.0kb upstream 2.0kb upstream 2000 false scaffold01080: 48972-50971 Cucumis sativus
Cucsa.143720 2.0kb downstream 2.0kb downstream 7976 true scaffold01080: 40996-48971 Cucumis sativus
Cucsa.143720 2.0kb downstream 2.0kb downstream 2000 false scaffold01080: 40996-42995 Cucumis sativus
Cucsa.143720 5.0kb upstream 5.0kb upstream 10976 true scaffold01080: 42996-53971 Cucumis sativus
Cucsa.143720 5.0kb upstream 5.0kb upstream 5000 false scaffold01080: 48972-53971 Cucumis sativus
Cucsa.143720 5.0kb downstream 5.0kb downstream 10976 true scaffold01080: 37996-48971 Cucumis sativus
Cucsa.143720 5.0kb downstream 5.0kb downstream 5000 false scaffold01080: 37996-42995 Cucumis sativus
Cucsa.143720 10.0kb upstream 10.0kb upstream 15976 true scaffold01080: 42996-58971 Cucumis sativus
Cucsa.143720 10.0kb upstream 10.0kb upstream 10000 false scaffold01080: 48972-58971 Cucumis sativus
Cucsa.143720 10.0kb downstream 10.0kb downstream 15976 true scaffold01080: 32996-48971 Cucumis sativus
Cucsa.143720 10.0kb downstream 10.0kb downstream 10000 false scaffold01080: 32996-42995 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303099 5265 Fabidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain