Gene : Cucsa.143480 C. sativus v1.0
Defline:  (1 of 3) PTHR11545:SF3 - 60S RIBOSOMAL PROTEIN L13A Genomic Order:  195
Name:  ? Cucsa.143480 Secondary Identifier:  ? PAC:16963796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.143480 0.5kb upstream 0.5kb upstream 2985 true scaffold01079: 1858748-1861732 Cucumis sativus
Cucsa.143480 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 1861233-1861732 Cucumis sativus
Cucsa.143480 0.5kb downstream 0.5kb downstream 2985 true scaffold01079: 1858248-1861232 Cucumis sativus
Cucsa.143480 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 1858248-1858747 Cucumis sativus
Cucsa.143480 1.0kb upstream 1.0kb upstream 3485 true scaffold01079: 1858748-1862232 Cucumis sativus
Cucsa.143480 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 1861233-1862232 Cucumis sativus
Cucsa.143480 1.0kb downstream 1.0kb downstream 3485 true scaffold01079: 1857748-1861232 Cucumis sativus
Cucsa.143480 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 1857748-1858747 Cucumis sativus
Cucsa.143480 2.0kb upstream 2.0kb upstream 4485 true scaffold01079: 1858748-1863232 Cucumis sativus
Cucsa.143480 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 1861233-1863232 Cucumis sativus
Cucsa.143480 2.0kb downstream 2.0kb downstream 4485 true scaffold01079: 1856748-1861232 Cucumis sativus
Cucsa.143480 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 1856748-1858747 Cucumis sativus
Cucsa.143480 5.0kb upstream 5.0kb upstream 7485 true scaffold01079: 1858748-1866232 Cucumis sativus
Cucsa.143480 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 1861233-1866232 Cucumis sativus
Cucsa.143480 5.0kb downstream 5.0kb downstream 7485 true scaffold01079: 1853748-1861232 Cucumis sativus
Cucsa.143480 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 1853748-1858747 Cucumis sativus
Cucsa.143480 10.0kb upstream 10.0kb upstream 7799 true scaffold01079: 1858748-1866546 Cucumis sativus
Cucsa.143480 10.0kb upstream 10.0kb upstream 5314 false scaffold01079: 1861233-1866546 Cucumis sativus
Cucsa.143480 10.0kb downstream 10.0kb downstream 12485 true scaffold01079: 1848748-1861232 Cucumis sativus
Cucsa.143480 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 1848748-1858747 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310047 5265 Fabidae View MSA
124069577 5270 Rosid View MSA
123745483 5271 Pentapetalae View MSA
122796740 5272 Eudicot View MSA
122042126 5273 Angiosperm View MSA
121343862 5274 Embryophyte View MSA
123428218 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain