Gene : Cucsa.143160 C. sativus v1.0
Defline:  (1 of 1) PTHR13861 - VACUOLAR ATP SYNTHASE SUBUNIT F Genomic Order:  163
Name:  ? Cucsa.143160 Secondary Identifier:  ? PAC:16963741
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7219 Cucumis sativus pathologic  
Csativus PWY-7229 Cucumis sativus pathologic  
Csativus PWY-841 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.143160 0.5kb upstream 0.5kb upstream 3781 true scaffold01079: 1458382-1462162 Cucumis sativus
Cucsa.143160 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 1458382-1458881 Cucumis sativus
Cucsa.143160 0.5kb downstream 0.5kb downstream 3781 true scaffold01079: 1458882-1462662 Cucumis sativus
Cucsa.143160 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 1462163-1462662 Cucumis sativus
Cucsa.143160 1.0kb upstream 1.0kb upstream 4281 true scaffold01079: 1457882-1462162 Cucumis sativus
Cucsa.143160 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 1457882-1458881 Cucumis sativus
Cucsa.143160 1.0kb downstream 1.0kb downstream 4281 true scaffold01079: 1458882-1463162 Cucumis sativus
Cucsa.143160 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 1462163-1463162 Cucumis sativus
Cucsa.143160 2.0kb upstream 2.0kb upstream 5281 true scaffold01079: 1456882-1462162 Cucumis sativus
Cucsa.143160 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 1456882-1458881 Cucumis sativus
Cucsa.143160 2.0kb downstream 2.0kb downstream 5281 true scaffold01079: 1458882-1464162 Cucumis sativus
Cucsa.143160 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 1462163-1464162 Cucumis sativus
Cucsa.143160 5.0kb upstream 5.0kb upstream 8281 true scaffold01079: 1453882-1462162 Cucumis sativus
Cucsa.143160 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 1453882-1458881 Cucumis sativus
Cucsa.143160 5.0kb downstream 5.0kb downstream 8281 true scaffold01079: 1458882-1467162 Cucumis sativus
Cucsa.143160 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 1462163-1467162 Cucumis sativus
Cucsa.143160 10.0kb upstream 10.0kb upstream 13281 true scaffold01079: 1448882-1462162 Cucumis sativus
Cucsa.143160 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 1448882-1458881 Cucumis sativus
Cucsa.143160 10.0kb downstream 10.0kb downstream 13281 true scaffold01079: 1458882-1472162 Cucumis sativus
Cucsa.143160 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 1462163-1472162 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309846 5265 Fabidae View MSA
124062785 5270 Rosid View MSA
123736748 5271 Pentapetalae View MSA
122792211 5272 Eudicot View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain